RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 ACBD6Q9BR61 282 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 TMED9Q9BVK6 235 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 EGLN1Q9GZT9 426 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 SLC38A1Q9H2H9 487 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 CACYBPQ9HB71 228 aaKnown RBP11.28□□□□□ -0.6
CAPN3-221ENST00000638141 CA10Q9NS85 328 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 OPN4Q9UHM6 478 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 CAMK2AQ9UQM7 478 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 ANGPT4Q9Y264 503 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 PLXNA4Q9HCM2 1894 aa11.28□□□□□ -0.6
CAPN3-221ENST00000638141 TRBV4-1A0A0J9YWV2 114 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 IMPA2O14732 288 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 TO15178 435 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 CREBL2O60519 120 aaPredicted RBP11.27□□□□□ -0.6
CAPN3-221ENST00000638141 EIF4E2O60573 245 aaKnown RBP11.27□□□□□ -0.6
CAPN3-221ENST00000638141 GPR32O75388 356 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 GUCA1CO95843 209 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 MOCS2O96007 188 aaPredicted RBP11.27□□□□□ -0.6
CAPN3-221ENST00000638141 WNT1P04628 370 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 URODP06132 367 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 CD3GP09693 182 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 ANKRD34CP0C6C1 535 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 ZNF16P17020 682 aaPredicted RBP11.27□□□□□ -0.6
CAPN3-221ENST00000638141 ELAVL4P26378 380 aaKnown RBP11.27□□□□□ -0.6
CAPN3-221ENST00000638141 HSD3B2P26439 372 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 CCR9P51686 369 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 DLX5P56178 289 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 GMFBP60983 142 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 SREBF2Q12772 1141 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 CPSF6Q16630 551 aaKnown RBP eCLIP11.27□□□□□ -0.6
CAPN3-221ENST00000638141 LYPLAL1Q5VWZ2 237 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 PTRHD1Q6GMV3 140 aaKnown RBP11.27□□□□□ -0.6
CAPN3-221ENST00000638141 TMEM88Q6PEY1 159 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 LINGO4Q6UY18 593 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 RHOUQ7L0Q8 258 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 BCDIN3DQ7Z5W3 292 aaKnown RBP11.27□□□□□ -0.6
CAPN3-221ENST00000638141 SERINC5Q86VE9 423 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 EID2Q8N6I1 236 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 FBXO15Q8NCQ5 510 aaPredicted RBP11.27□□□□□ -0.6
CAPN3-221ENST00000638141 OR51Q1Q8NH59 317 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 TVP23BQ9NYZ1 205 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 TREM2Q9NZC2 230 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 KLK14Q9P0G3 267 aa11.27□□□□□ -0.6
CAPN3-221ENST00000638141 DNAJC25-GNG10A0A024R161 153 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 TRBC2A0A5B9 178 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 KDM4EB2RXH2 506 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 CHURC1-FNTBB4DL54 471 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 YY2O15391 372 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 UGDHO60701 494 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 SEMA7AO75326 666 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 SOX14O95416 240 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 PAK4O96013 591 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 MT-ND4P03905 459 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 GPX4P36969 197 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 STAT5AP42229 794 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 MTNR1AP48039 350 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 FNTBP49356 437 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 RNF144AP50876 292 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 DGCR2P98153 550 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 CDK5Q00535 292 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 E2F1Q01094 437 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 GAB1Q13480 694 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 HABP2Q14520 560 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 GANABQ14697 944 aaKnown RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 MPPED2Q15777 294 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 MS4A13Q5J8X5 152 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 MARCH8Q5T0T0 291 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 UBXN11Q5T124 520 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 DCST1Q5T197 706 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 CPTPQ5TA50 214 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 OR7E24Q6IFN5 339 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 PGBD2Q6P3X8 592 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 SFXN4Q6P4A7 337 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 RBMS3Q6XE24 437 aaKnown RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 FBXO16Q8IX29 292 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 KLHL36Q8N4N3 616 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 MEIOBQ8N635 442 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 GPR156Q8NFN8 814 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 RXFP4Q8TDU9 374 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 SMAP2Q8WU79 429 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 CMTM3Q96MX0 182 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 MS4A4EQ96PG1 132 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 FUZQ9BT04 418 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 TBC1D17Q9HA65 648 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 C14orf105Q9NVL8 296 aa11.27□□□□□ -0.61
CAPN3-221ENST00000638141 RPH3AQ9Y2J0 694 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-221ENST00000638141 ANKRD61A6NGH8 418 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 TTLL8A6PVC2 850 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 NUDT19A8MXV4 375 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 FFAR1O14842 300 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 ZNF749O43361 778 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 HOXA2O43364 376 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 PEX10O60683 326 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 RB1P06400 928 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 ALPIP09923 528 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 SAGP10523 405 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-221ENST00000638141 LAMP1P11279 417 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 EPORP19235 508 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 RAB8AP61006 207 aa11.26□□□□□ -0.61
CAPN3-221ENST00000638141 SNRPEP62304 92 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms