RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 QPCTLQ9NXS2 382 aa7.14□□□□□ -1.27
PNKP-229ENST00000637897 ZIM2Q9NZV7 527 aa7.14□□□□□ -1.27
PNKP-229ENST00000637897 STX18Q9P2W9 335 aaKnown RBP7.14□□□□□ -1.27
PNKP-229ENST00000637897 FBXL2Q9UKC9 423 aa7.14□□□□□ -1.27
PNKP-229ENST00000637897 UTS2RQ9UKP6 389 aa7.14□□□□□ -1.27
PNKP-229ENST00000637897 SNX6Q9UNH7 406 aa7.14□□□□□ -1.27
PNKP-229ENST00000637897 POMPQ9Y244 141 aa7.14□□□□□ -1.27
PNKP-229ENST00000637897 GPR45Q9Y5Y3 372 aa7.14□□□□□ -1.27
PNKP-229ENST00000637897 A0A1W2PPR1 153 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 MYO1GB0I1T2 1018 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 SNPHO15079 494 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 ANGPT2O15123 496 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 PCDH7O60245 1069 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 ZIC3O60481 467 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 WDR1O75083 606 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 ULK1O75385 1050 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 SLC22A3O75751 556 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 KRT36O76013 467 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 ANP32DO95626 131 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 EPPINO95925 133 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 IGKV1D-16P01601 117 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 HSD3B1P14060 373 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 DRD5P21918 477 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 ME2P23368 584 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 HSD3B2P26439 372 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 TIA1P31483 386 aaKnown RBP eCLIP7.13□□□□□ -1.27
PNKP-229ENST00000637897 MAP3K8P41279 467 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 PPICP45877 212 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 ZFP36L2P47974 494 aaKnown RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 ALDH9A1P49189 494 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 GFRA1P56159 465 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 B3GALT5-AS1P59052 145 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 PSME3P61289 254 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 EMX2Q04743 252 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 SLC34A1Q06495 639 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 FOXF2Q12947 444 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 C6orf136Q5SQH8 315 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 WLSQ5T9L3 541 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 RIPPLY2Q5TAB7 128 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 PAOXQ6QHF9 649 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 BLOC1S3Q6QNY0 202 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 PAGE2Q7Z2X7 111 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 TRIM46Q7Z4K8 759 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 WDR53Q7Z5U6 358 aaPredicted RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 FUNDC1Q8IVP5 155 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 DND1Q8IYX4 353 aaKnown RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 FAM9CQ8IZT9 166 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 TAGAPQ8N103 731 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 C9orf106Q8NAJ2 232 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 FNDC5Q8NAU1 212 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 C7orf57Q8NEG2 295 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 FAM83FQ8NEG4 500 aaPredicted RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 ASB5Q8WWX0 329 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 HOXB13Q92826 284 aaPredicted RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 TMBIM1Q969X1 311 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 EXOSC8Q96B26 276 aaKnown RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 SLC35A4Q96G79 324 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 FCRL1Q96LA6 429 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 BTBD9Q96Q07 612 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 CDRT15Q96T59 188 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 NPAS1Q99742 590 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 HOPXQ9BPY8 73 aaPredicted RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 GLIPR2Q9H4G4 154 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 SPAG4Q9NPE6 437 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 SERHLQ9NQF3 203 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 SLC35C2Q9NQQ7 365 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 AHSPQ9NZD4 102 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 COQ3Q9NZJ6 369 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 NKX1-2Q9UD57 310 aaPredicted RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 ACAD8Q9UKU7 415 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 BOKQ9UMX3 212 aaPredicted RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 PCDHGB3Q9Y5G1 929 aa7.13□□□□□ -1.27
PNKP-229ENST00000637897 NUP214P35658 2090 aaPredicted RBP7.13□□□□□ -1.27
PNKP-229ENST00000637897 FAM234BA2RU67 622 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 FRG2CA6NGY1 282 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 FIGNL2A6NMB9 653 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 H0Y3Z8 333 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 UPK1AO00322 258 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 NR5A2O00482 541 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 FBP2O00757 339 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 LSM1O15116 133 aaKnown RBP7.12□□□□□ -1.27
PNKP-229ENST00000637897 CFLARO15519 480 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 PLOD3O60568 738 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 PDE5AO76074 875 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 SNX4O95219 450 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 STAMBPO95630 424 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 NPPAP01160 153 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 DRD2P14416 443 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 NAGAP17050 411 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 ELAVL4P26378 380 aaKnown RBP7.12□□□□□ -1.27
PNKP-229ENST00000637897 GDF1P27539 372 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 SSTR2P30874 369 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 VHLP40337 213 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 STARP49675 285 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 AGFG1P52594 562 aaKnown RBP7.12□□□□□ -1.27
PNKP-229ENST00000637897 TRAP1Q12931 704 aaKnown RBP7.12□□□□□ -1.27
PNKP-229ENST00000637897 RCAN2Q14206 197 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 IMPG1Q17R60 797 aa7.12□□□□□ -1.27
PNKP-229ENST00000637897 SAMD4BQ5PRF9 694 aaKnown RBP7.12□□□□□ -1.27
PNKP-229ENST00000637897 EXOSC6Q5RKV6 272 aaKnown RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms