RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CCL7P80098 99 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 LCN2P80188 198 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MRPS22P82650 360 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 OCA2Q04671 838 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SLC34A1Q06495 639 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 TNFRSF9Q07011 255 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 DBPQ10586 325 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 TCF15Q12870 199 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 BNIP2Q12982 314 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PDIA2Q13087 525 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 EIF4EBP2Q13542 120 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 ALKBH1Q13686 389 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 GRB14Q14449 540 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ZNF268Q14587 947 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 TNXAQ16473 311 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 RPE65Q16518 533 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MRPL23Q16540 153 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 HIST2H2ACQ16777 129 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 KNOP1Q1ED39 458 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 SOWAHAQ2M3V2 549 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 QRICH1Q2TAL8 776 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PXDC1Q5TGL8 231 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 FAM90A2PQ658T7 463 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 VASNQ6EMK4 673 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 FRMPD2BQ6IN97 320 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 APOBEC3HQ6NTF7 200 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 EFCAB12Q6NXP0 572 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 DOK6Q6PKX4 331 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SPESP1Q6UW49 350 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 BTNL8Q6UX41 500 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 CCNI2Q6ZMN8 369 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 C3P1Q6ZMU1 363 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 DPY19L3Q6ZPD9 716 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SLC16A12Q6ZSM3 486 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 FAM92BQ6ZTR7 304 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 STOX1Q6ZVD7 989 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 HIST3H2AQ7L7L0 130 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GPR141Q7Z602 305 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ANKRD46Q86W74 232 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ZC3HC1Q86WB0 502 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 TMEM173Q86WV6 379 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 DHFR2Q86XF0 187 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ADGRG3Q86Y34 549 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PHF13Q86YI8 300 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 CBWD2Q8IUF1 395 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ADGRG5Q8IZF4 528 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 KIRREL3Q8IZU9 778 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 APCDD1Q8J025 514 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SYS1Q8N2H4 156 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PELI3Q8N2H9 469 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 METTL4Q8N3J2 472 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 RIBC1Q8N443 379 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 ZCCHC9Q8N567 271 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 LILRA3Q8N6C8 439 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 ATP6V0D2Q8N8Y2 350 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 LRRC75AQ8NAA5 344 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 OR7G2Q8NG99 324 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 WDR36Q8NI36 951 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 TMEM239Q8WW34 195 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GGHQ92820 318 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GLG1Q92896 1179 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MARC2Q969Z3 335 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 TMEM45BQ96B21 275 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MSI2Q96DH6 328 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 TRMT61AQ96FX7 289 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 NSL1Q96IY1 281 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 CELF6Q96J87 481 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 ZBTB45Q96K62 511 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 RILPQ96NA2 401 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ZIM3Q96PE6 472 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 TNFRSF13CQ96RJ3 184 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MCCC1Q96RQ3 725 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 SLC22A12Q96S37 553 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ZNF2Q9BSG1 426 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 FEM1AQ9BSK4 669 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 DCUN1D5Q9BTE7 237 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MCRIP2Q9BUT9 160 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 TRMT61BQ9BVS5 477 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 TSSK1BQ9BXA7 367 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MAP1LC3CQ9BXW4 147 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 HDHD5Q9BXW7 423 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ZNF717Q9BY31 904 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 SLC39A8Q9C0K1 460 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PCBD2Q9H0N5 130 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 TRABDQ9H4I3 376 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 DCLRE1BQ9H816 532 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 GPN2Q9H9Y4 310 aaPredicted RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 NMUR1Q9HB89 426 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 HRASLSQ9HDD0 168 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 SIRT7Q9NRC8 400 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MRPL17Q9NRX2 175 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 THSD1Q9NS62 852 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 ABCC13Q9NSE7 274 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 NECAP2Q9NVZ3 263 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 MIOSQ9NXC5 875 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 PTTG2Q9NZH5 202 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 CCDC59Q9P031 241 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 NXT1Q9UKK6 140 aaKnown RBP2.77□□□□□ -1.97
VIM-210ENST00000637053 ACSL5Q9ULC5 683 aa2.77□□□□□ -1.97
VIM-210ENST00000637053 NDRG2Q9UN36 371 aaKnown RBP2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms