RNA–Protein interactions for RNA: ENST00000636934.1

CLN8-211, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5 BASIC

Gene CLN8, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-211ENST00000636934 BCDIN3DQ7Z5W3 292 aaKnown RBP17.23■□□□□ 0.35
CLN8-211ENST00000636934 MCATQ8IVS2 390 aaKnown RBP17.23■□□□□ 0.35
CLN8-211ENST00000636934 TMEM52Q8NDY8 209 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 ANKRD9Q96BM1 317 aaPredicted RBP17.23■□□□□ 0.35
CLN8-211ENST00000636934 CTHRC1Q96CG8 243 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 UCK1Q9HA47 277 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 EXOSC4Q9NPD3 245 aaKnown RBP17.23■□□□□ 0.35
CLN8-211ENST00000636934 SSR3Q9UNL2 185 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 GPX5O75715 221 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 NKX2-2O95096 273 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 HNRNPCP07910 306 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLN8-211ENST00000636934 GNSP15586 552 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 POU3F3P20264 500 aaPredicted RBP17.23■□□□□ 0.35
CLN8-211ENST00000636934 GABRA3P34903 492 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 MLLT1Q03111 559 aaPredicted RBP17.23■□□□□ 0.35
CLN8-211ENST00000636934 MAP4K2Q12851 820 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 ZNHIT3Q15649 155 aaPredicted RBP17.23■□□□□ 0.35
CLN8-211ENST00000636934 ZNF181Q2M3W8 571 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 PGGHGQ32M88 737 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 CCNJQ5T5M9 372 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 ZNF620Q6ZNG0 422 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 SIMC1Q8NDZ2 872 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 OR2T33Q8NG76 320 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 LRRC61Q9BV99 259 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 NUAK2Q9H093 628 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 TMEM5Q9Y2B1 443 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 NTNG1Q9Y2I2 539 aa17.23■□□□□ 0.35
CLN8-211ENST00000636934 REV3LO60673 3130 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 A0A075B6Q4 140 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 CHST10O43529 356 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 RDH16O75452 317 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 CHRNB1P11230 501 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 RNH1P13489 461 aaKnown RBP17.22■□□□□ 0.35
CLN8-211ENST00000636934 GPR4P46093 362 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 BCAP31P51572 246 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 WNT4P56705 351 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 ZSWIM7Q19AV6 140 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 SOWAHCQ53LP3 525 aaPredicted RBP17.22■□□□□ 0.35
CLN8-211ENST00000636934 PERM1Q5SV97 790 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 MRPL2Q5T653 305 aaKnown RBP17.22■□□□□ 0.35
CLN8-211ENST00000636934 RPL13AP3Q6NVV1 102 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 ZNF761Q86XN6 746 aaPredicted RBP17.22■□□□□ 0.35
CLN8-211ENST00000636934 GKN2Q86XP6 184 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 GALNT12Q8IXK2 581 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 CDK20Q8IZL9 346 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 VWA5B2Q8N398 1253 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 POGLUT1Q8NBL1 392 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 TMEM255BQ8WV15 326 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 PIK3R3Q92569 461 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 HOXB13Q92826 284 aaPredicted RBP17.22■□□□□ 0.35
CLN8-211ENST00000636934 TCTN2Q96GX1 697 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 ZNF559Q9BR84 538 aa17.22■□□□□ 0.35
CLN8-211ENST00000636934 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.22■□□□□ 0.35
CLN8-211ENST00000636934 FUOMA2VDF0 154 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 CDHR4A6H8M9 788 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 UNC119BA6NIH7 251 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 SURF4O15260 269 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 BRINP1O60477 761 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 THY1P04216 161 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 HBQ1P09105 142 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 CPEP16870 476 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 SOX3P41225 446 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 RPS3AP61247 264 aaKnown RBP17.21■□□□□ 0.35
CLN8-211ENST00000636934 COPZ1P61923 177 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 PPP1CAP62136 330 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 EXOSC7Q15024 291 aaKnown RBP17.21■□□□□ 0.35
CLN8-211ENST00000636934 OR1Q1Q15612 314 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 PRTGQ2VWP7 1150 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 CLEC12AQ5QGZ9 265 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.21■□□□□ 0.35
CLN8-211ENST00000636934 MEX3DQ86XN8 651 aaKnown RBP17.21■□□□□ 0.35
CLN8-211ENST00000636934 SFTPA2Q8IWL1 248 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 BRIX1Q8TDN6 353 aaKnown RBP17.21■□□□□ 0.35
CLN8-211ENST00000636934 CNPPD1Q9BV87 410 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 ASPNQ9BXN1 380 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 RNF167Q9H6Y7 350 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 FAM60AQ9NP50 221 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 STARD5Q9NSY2 213 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 UGT2A1Q9Y4X1 527 aa17.21■□□□□ 0.35
CLN8-211ENST00000636934 STK25O00506 426 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 UPK1BO75841 260 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 TSPAN19P0C672 248 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 ETV5P41161 510 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 ETV6P41212 452 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 FASLGP48023 281 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 ETV1P50549 477 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 CDH11P55287 796 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 MAPK14Q16539 360 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 ZNF438Q7Z4V0 828 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 LAPTM4BQ86VI4 370 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 OR52L1Q8NGH7 329 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 OR9A4Q8NGU2 314 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 SNRNP27Q8WVK2 155 aaKnown RBP17.2■□□□□ 0.34
CLN8-211ENST00000636934 ORAI3Q9BRQ5 295 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 LMF2Q9BU23 707 aaKnown RBP17.2■□□□□ 0.34
CLN8-211ENST00000636934 PHF7Q9BWX1 381 aaPredicted RBP17.2■□□□□ 0.34
CLN8-211ENST00000636934 TMEM27Q9HBJ8 222 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 H2AFY2Q9P0M6 372 aaPredicted RBP17.2■□□□□ 0.34
CLN8-211ENST00000636934 SLC9B1P1A6NJY1 282 aa17.2■□□□□ 0.34
CLN8-211ENST00000636934 ZNF670-ZNF695F2Z2N8 137 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms