RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 PDLIM4P50479 330 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 FABP6P51161 128 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 STK11Q15831 433 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 ZNF628Q5EBL2 1059 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 PRR31Q5SQ13 230 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 TBC1D1Q86TI0 1168 aaPredicted RBP16.04■□□□□ 0.16
CLN6-212ENST00000636020 ISCA2Q86U28 154 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 MARCH3Q86UD3 253 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 TDRPQ86YL5 185 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 STAG3L4Q8TBR4 150 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 KAT2AQ92830 837 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 KLHL29Q96CT2 875 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 ERP27Q96DN0 273 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 TSPAN17Q96FV3 270 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 SOX7Q9BT81 388 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 BHLHE41Q9C0J9 482 aaPredicted RBP16.04■□□□□ 0.16
CLN6-212ENST00000636020 ALG9Q9H6U8 611 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 PSME2Q9UL46 239 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 RNF11Q9Y3C5 154 aa16.04■□□□□ 0.16
CLN6-212ENST00000636020 IGLV3-32A0A0A0MS00 114 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 UGDHO60701 494 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 GUCY1B2O75343 617 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 ZNF17P17021 662 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 MAPK12P53778 367 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 ACTG1P63261 375 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 B3GLCTQ6Y288 498 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 ESPNLQ6ZVH7 1005 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 PAGE2Q7Z2X7 111 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 TUSC5Q8IXB3 177 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 PDIK1LQ8N165 341 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 PIAS4Q8N2W9 510 aaPredicted RBP16.03■□□□□ 0.16
CLN6-212ENST00000636020 RNF128Q8TEB7 428 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 TRPC4APQ8TEL6 797 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 ABHD3Q8WU67 409 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 OSTF1Q92882 214 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 MUCL1Q96DR8 90 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 ATOH8Q96SQ7 321 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 PIMREGQ9BSJ6 248 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 KLHL13Q9P2N7 655 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 TMEFF2Q9UIK5 374 aaPredicted RBP16.03■□□□□ 0.16
CLN6-212ENST00000636020 POU2F3Q9UKI9 436 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 VDAC3Q9Y277 283 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 OR10H1Q9Y4A9 318 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 ANGPTL3Q9Y5C1 460 aa16.03■□□□□ 0.16
CLN6-212ENST00000636020 SUPT3HB4E1H0 165 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 SUPT3HO75486 399 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 PABPC4LP0CB38 370 aaKnown RBP16.02■□□□□ 0.16
CLN6-212ENST00000636020 ZNF23P17027 643 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 PIK3CGP48736 1102 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 RAC1P63000 192 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 ILF2Q12905 390 aaKnown RBP16.02■□□□□ 0.16
CLN6-212ENST00000636020 TIMM23BQ5SRD1 257 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 HBMQ6B0K9 141 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 SLC22A25Q6T423 547 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 SSX8Q7RTT4 187 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 L3MBTL4Q8NA19 623 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 GCDHQ92947 438 aaPredicted RBP16.02■□□□□ 0.16
CLN6-212ENST00000636020 TM4SF18Q96CE8 201 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 LRRC39Q96DD0 335 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 FOXN4Q96NZ1 517 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 NPAS1Q99742 590 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 MRPL1Q9BYD6 325 aaKnown RBP16.02■□□□□ 0.16
CLN6-212ENST00000636020 OCEL1Q9H607 264 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 FAM120CQ9NX05 1096 aaKnown RBP16.02■□□□□ 0.16
CLN6-212ENST00000636020 NSMCE4AQ9NXX6 385 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 AHSPQ9NZD4 102 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 MGAT4BQ9UQ53 548 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 ZNF780BQ9Y6R6 833 aa16.02■□□□□ 0.16
CLN6-212ENST00000636020 ARFGEF3Q5TH69 2177 aa16.02■□□□□ 0.15
CLN6-212ENST00000636020 ESYT3A0FGR9 886 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 SMAD9O15198 467 aaKnown RBP16.01■□□□□ 0.15
CLN6-212ENST00000636020 GMFGO60234 142 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 LYZL6O75951 148 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 PSMA4P25789 261 aaKnown RBP16.01■□□□□ 0.15
CLN6-212ENST00000636020 PSG6Q00889 435 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 RNPS1Q15287 305 aaKnown RBP16.01■□□□□ 0.15
CLN6-212ENST00000636020 ERCC6LQ2NKX8 1250 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 ZNF544Q6NX49 715 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 Q6ZT83 130 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 CCDC116Q8IYX3 515 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 METTL4Q8N3J2 472 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 GTPBP8Q8N3Z3 284 aaPredicted RBP16.01■□□□□ 0.15
CLN6-212ENST00000636020 GRK7Q8WTQ7 553 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 MS4A14Q96JA4 679 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 GP6Q9HCN6 339 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 METRNQ9UJH8 293 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 ACOT9Q9Y305 439 aa16.01■□□□□ 0.15
CLN6-212ENST00000636020 FAM157AC9JC47 383 aa16■□□□□ 0.15
CLN6-212ENST00000636020 KERAO60938 352 aa16■□□□□ 0.15
CLN6-212ENST00000636020 PIAS1O75925 651 aa16■□□□□ 0.15
CLN6-212ENST00000636020 DHRS4L1P0CG22 281 aa16■□□□□ 0.15
CLN6-212ENST00000636020 BMP4P12644 408 aa16■□□□□ 0.15
CLN6-212ENST00000636020 MTHFD2P13995 350 aa16■□□□□ 0.15
CLN6-212ENST00000636020 STMN1P16949 149 aa16■□□□□ 0.15
CLN6-212ENST00000636020 CLK3P49761 638 aaKnown RBP16■□□□□ 0.15
CLN6-212ENST00000636020 CARD18P57730 90 aa16■□□□□ 0.15
CLN6-212ENST00000636020 CHRNB3Q05901 458 aa16■□□□□ 0.15
CLN6-212ENST00000636020 SPOCK1Q08629 439 aa16■□□□□ 0.15
CLN6-212ENST00000636020 C17orf67Q0P5P2 114 aa16■□□□□ 0.15
CLN6-212ENST00000636020 DLG1Q12959 904 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms