RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 VANGL1Q8TAA9 524 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 FAM81AQ8TBF8 368 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 LMX1AQ8TE12 382 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 FCGR1BQ92637 280 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 ATOH1Q92858 354 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 C12orf43Q96C57 262 aaKnown RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 C16orf58Q96GQ5 468 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 TCTN2Q96GX1 697 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 NIPSNAP1Q9BPW8 284 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 UQCC2Q9BRT2 126 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 GSX2Q9BZM3 304 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 KLHL25Q9H0H3 589 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 RNF6Q9Y252 685 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 ARHGEF17Q96PE2 2063 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 FANCMQ8IYD8 2048 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 LRP4O75096 1905 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 SNRNP200O75643 2136 aaKnown RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 SH3D21A4FU49 640 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 FFAR1O14842 300 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 XPNPEP2O43895 674 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 OR10H3O60404 316 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 TUSC2O75896 110 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 AK1P00568 194 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 GASTP01350 101 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 PROS1P07225 676 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 PVRP15151 417 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 ELAVL4P26378 380 aaKnown RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 SIM1P81133 766 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 ILKQ13418 452 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 FZD5Q13467 585 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 GAS6Q14393 721 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 LARS2Q15031 903 aaKnown RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 ARHGAP11BQ3KRB8 267 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 AADACL4Q5VUY2 407 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 GTF2IRD2BQ6EKJ0 949 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 HEPHL1Q6MZM0 1159 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 MFSD12Q6NUT3 480 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 GTF2IRD2Q86UP8 949 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 MCATQ8IVS2 390 aaKnown RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 CDH26Q8IXH8 852 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 ENTHD1Q8IYW4 607 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 ARL14Q8N4G2 192 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 GTPBP3Q969Y2 492 aaKnown RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 GIMAP5Q96F15 307 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 SLC35A4Q96G79 324 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 PRRC1Q96M27 445 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 Q96MT0 163 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 SLC38A3Q99624 504 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 ITPAQ9BY32 194 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 EVA1AQ9H8M9 152 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 NRIP3Q9NQ35 241 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 EQTNQ9NQ60 294 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 CLN6Q9NWW5 311 aa6.68□□□□□ -1.34
BRCA1-230ENST00000634433 WARS2Q9UGM6 360 aaKnown RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 MRPS33Q9Y291 106 aaKnown RBP6.68□□□□□ -1.34
BRCA1-230ENST00000634433 ZAR1LA6NP61 321 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 A8MV72 311 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 H3BMQ9 156 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ATP1B1P05026 303 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ALOX5P09917 674 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CCNA2P20248 432 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 GSTM3P21266 225 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 PCMT1P22061 227 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 EPHA2P29317 976 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 AVPR2P30518 371 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CTSKP43235 329 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ETV1P50549 477 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ALDH6A1Q02252 535 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 RPL6Q02878 288 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 LTB4RQ15722 352 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 EIPR1Q53HC9 387 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 GARNL3Q5VVW2 1013 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF770Q6IQ21 691 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CD300LDQ6UXZ3 194 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CA13Q8N1Q1 262 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 FAM160A2Q8N612 972 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF321PQ8N8H1 164 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 CDRT4Q8N9R6 151 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 OR7G2Q8NG99 324 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 OR56B2PQ8NGI1 322 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ZNF675Q8TD23 568 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 TRUB1Q8WWH5 349 aaKnown RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ST8SIA4Q92187 359 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 SLC38A4Q969I6 547 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 STACQ99469 402 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ARHGDIGQ99819 225 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 LHPPQ9H008 270 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 SLC38A1Q9H2H9 487 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 PIGUQ9H490 435 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ANKRD19PQ9H560 264 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ARMC7Q9H6L4 198 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 GPN2Q9H9Y4 310 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-230ENST00000634433 IL21RQ9HBE5 538 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 RLIMQ9NVW2 624 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 C2orf42Q9NWW7 574 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 ERVK-18Q9QC07 812 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 RHCGQ9UBD6 479 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 EPHA6Q9UF33 1036 aa6.67□□□□□ -1.34
BRCA1-230ENST00000634433 TEKT2Q9UIF3 430 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms