RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 PPP1R35Q8TAP8 253 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 SLC2A12Q8TD20 617 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 ARMC1Q9NVT9 282 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 NINQ8N4C6 2090 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 A0A0A6YYC8 382 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 NSG1A0A0A6YYJ2 146 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 H7C2Y5 167 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 I3L1I5 382 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 TYROBPO43914 113 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 DBHP09172 617 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 LAMP1P11279 417 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 GABRR1P24046 479 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 TGFBR3Q03167 851 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 PTPRRQ15256 657 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 SDSLQ96GA7 329 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 ARL6Q9H0F7 186 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 RHBDD3Q9Y3P4 386 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 NPIPB15A6NHN6 443 aaPredicted RBP11.1□□□□□ -0.63
SHPRH-211ENST00000629427 OR8U9P0C7N5 309 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 CD6P30203 668 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 AKR1C8PQ5T2L2 129 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 DYNLRB1Q9NP97 96 aa11.1□□□□□ -0.63
SHPRH-211ENST00000629427 A0A087WUU8 490 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 A6NIZ1 184 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 M0R3H8 397 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 GOSR2O14653 212 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 CHMP24386 653 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 CNR2P34972 360 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 RAP1BP61224 184 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 RAP1AP62834 184 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 PLCXD3Q63HM9 321 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 DCP2Q8IU60 420 aaKnown RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 NFS1Q9Y697 457 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 LOC102725191A0A1B0GVB3 256 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 A0A1W2PPW3 197 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 PRSS38A1L453 326 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 IFNA4P05014 189 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 GMPRP36959 345 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 NAGSQ8N159 534 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 MINDY1Q8N5J2 469 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF420Q8TAQ5 688 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TMEM40Q8WWA1 233 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TOMM40LQ969M1 308 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TSNAXQ99598 290 aaKnown RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 SLC12A9Q9BXP2 914 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 RLIMQ9NVW2 624 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 LRFN1Q9P244 771 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 LRIT1Q9P2V4 623 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 A0A0U1RQK1 487 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TMX2-CTNND1H3BSU7 103 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 LRRTM2O43300 516 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 LCKP06239 509 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 HTR2AP28223 471 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 CSNK1A1P48729 337 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 ACTBP60709 375 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 RRAS2P62070 204 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 ACTG1P63261 375 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TMEM135Q86UB9 458 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 LRRC18Q8N456 261 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 LGALS12Q96DT0 336 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 ZNF681Q96N22 645 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TMEM246Q9BRR3 403 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 HEBP1Q9NRV9 189 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 LSM5Q9Y4Y9 91 aaKnown RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 PHRF1Q9P1Y6 1649 aaKnown RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 NPIPA5A0A0B4J1W7 369 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 A0A0U1RQS6 177 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 DCDC2BA2VCK2 349 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 NPIPA7E9PJI5 369 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 NPIPA8P0DM63 369 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 FECHP22830 423 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TMBIM6P55061 237 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 RPP30P78346 268 aaKnown RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 IRF4Q15306 451 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 ESCO2Q56NI9 601 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 LETMD1Q6P1Q0 360 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TMEM150AQ86TG1 271 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 ZMYND19Q96E35 227 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 ALG8Q9BVK2 526 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TMEM100Q9NV29 134 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 CNIH4Q9P003 139 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 RIMS3Q9UJD0 308 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 NUDT21O43809 227 aaKnown RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 MPIG6BO95866 241 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TFPTP0C1Z6 253 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 TIMP2P16035 220 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 CDK3Q00526 305 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 GLO1Q04760 184 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 NKPD1Q17RQ9 610 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 SFRP4Q6FHJ7 346 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 PNCKQ6P2M8 343 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 OR52E1Q8NGJ3 308 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 RLN3Q8WXF3 142 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 MSANTD3Q96H12 275 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 PBDC1Q9BVG4 233 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 DMRT3Q9NQL9 472 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 CXXC1Q9P0U4 656 aaPredicted RBP11.09□□□□□ -0.63
SHPRH-211ENST00000629427 ENTPD2Q9Y5L3 495 aa11.09□□□□□ -0.63
SHPRH-211ENST00000629427 OR6C6A6NF89 314 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms