RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 RBMXL3Q8N7X1 1067 aaKnown RBP8.47□□□□□ -1.05
GABRB3-216ENST00000628124 OR4K13Q8NH42 304 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 CNIH3Q8TBE1 160 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 MUCL1Q96DR8 90 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 SENP5Q96HI0 755 aaPredicted RBP8.47□□□□□ -1.05
GABRB3-216ENST00000628124 ENKD1Q9H0I2 346 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 APOBEC3GQ9HC16 384 aaKnown RBP8.47□□□□□ -1.05
GABRB3-216ENST00000628124 RHBDD3Q9Y3P4 386 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 BTBD17A6NE02 478 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 H7C1Q1 480 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 ZNF44P15621 663 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 GLB1P16278 677 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 SCAPQ12770 1279 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 SLC6A19Q695T7 634 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 Q6ZVL8 140 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 TSPYL5Q86VY4 417 aaPredicted RBP8.47□□□□□ -1.05
GABRB3-216ENST00000628124 OR6C4Q8NGE1 309 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 OR9I1Q8NGQ6 314 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 OR6F1Q8NGZ6 308 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 ADAMTS16Q8TE57 1224 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 CREB3L4Q8TEY5 395 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 NT5C3BQ969T7 300 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 C1orf74Q96LT6 269 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 SLC2A13Q96QE2 648 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 NUDT9Q9BW91 350 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 SAGE1Q9NXZ1 904 aa8.47□□□□□ -1.05
GABRB3-216ENST00000628124 ZNF223Q9UK11 482 aaPredicted RBP8.47□□□□□ -1.05
GABRB3-216ENST00000628124 K7EPK0 472 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 MSTNO14793 375 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 EEDO75530 441 aaKnown RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 PIGRP01833 764 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 SOD2P04179 222 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 GSK3AP49840 483 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 FABP6P51161 128 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 TAS2R46P59540 309 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 SEC61A1P61619 476 aaKnown RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 RPS27AP62979 156 aaKnown RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 UBA52P62987 128 aaKnown RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 HBG1P69891 147 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 HBG2P69892 147 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 SRPXP78539 464 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 FGFBP1Q14512 234 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 FAM74A1Q5RGS3 127 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 TMEM71Q6P5X7 295 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 PGAP1Q75T13 922 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 FAM71E2Q8N5Q1 922 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 CLEC4CQ8WTT0 213 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 FAM71F1Q96KD3 344 aaPredicted RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 CCNL2Q96S94 520 aaPredicted RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 ST6GALNAC5Q9BVH7 336 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 PBX4Q9BYU1 374 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 SFXN1Q9H9B4 322 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 MRPL15Q9P015 296 aaKnown RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 ATXN7L1Q9ULK2 861 aaPredicted RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 EIF3FO00303 357 aaPredicted RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 RFPL3O75679 317 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 CBX7O95931 251 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 STSP08842 583 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 HLA-DOBP13765 273 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 TBPP20226 339 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 ELK4P28324 431 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 CSNK1A1P48729 337 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 RAB11AP62491 216 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 ERVK-25P63136 954 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 DEFA6Q01524 100 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 MC2RQ01718 297 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 ELAVL3Q14576 367 aaKnown RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 IRF4Q15306 451 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 MANEALQ5VSG8 457 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 FAM122CQ6P4D5 195 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 PRSS48Q7RTY5 328 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 RBM12BQ8IXT5 1001 aaKnown RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 ITFG2Q969R8 447 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 SCLYQ96I15 445 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 PATZ1Q9HBE1 687 aaKnown RBP8.46□□□□□ -1.05
GABRB3-216ENST00000628124 SCML1Q9UN30 329 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 ENTPD2Q9Y5L3 495 aa8.46□□□□□ -1.05
GABRB3-216ENST00000628124 E7ESA3 106 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 ONECUT3O60422 494 aaPredicted RBP8.46□□□□□ -1.06
GABRB3-216ENST00000628124 CD6P30203 668 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 MAP2K4P45985 399 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 RABIFP47224 123 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 KCNQ1P51787 676 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 ARG2P78540 354 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 HNF4GQ14541 408 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 LAPTM4AQ15012 233 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 SF3A2Q15428 464 aaKnown RBP8.46□□□□□ -1.06
GABRB3-216ENST00000628124 NKPD1Q17RQ9 610 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 SFRP5Q5T4F7 317 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 CST9LP1Q5W188 147 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 SVBPQ8N300 66 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 CDRT4Q8N9R6 151 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 PTERQ96BW5 349 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 LRFN5Q96NI6 719 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 SLC2A6Q9UGQ3 507 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 SRPK3Q9UPE1 567 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 SEC14L6B5MCN3 397 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 BEST1O76090 585 aa8.46□□□□□ -1.06
GABRB3-216ENST00000628124 S1PR4O95977 384 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms