RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 CHDHQ8NE62 594 aaPredicted RBP8.8□□□□□ -1
PDLIM5-223ENST00000627587 MAGEE2Q8TD90 523 aaPredicted RBP8.8□□□□□ -1
PDLIM5-223ENST00000627587 GPR151Q8TDV0 419 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 PTPMT1Q8WUK0 201 aaPredicted RBP8.8□□□□□ -1
PDLIM5-223ENST00000627587 PIK3R3Q92569 461 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 ZNF354BQ96LW1 612 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 VSTM2LQ96N03 204 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 ZNF300Q96RE9 604 aaPredicted RBP8.8□□□□□ -1
PDLIM5-223ENST00000627587 SDF2Q99470 211 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 MESP1Q9BRJ9 268 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 CNPPD1Q9BV87 410 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 OSBPL11Q9BXB4 747 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 OSBPL10Q9BXB5 764 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 TRIM45Q9H8W5 580 aaPredicted RBP8.8□□□□□ -1
PDLIM5-223ENST00000627587 REEP1Q9H902 201 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 SMURF2Q9HAU4 748 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 CACYBPQ9HB71 228 aaKnown RBP8.8□□□□□ -1
PDLIM5-223ENST00000627587 FBXO8Q9NRD0 319 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 UBAP1Q9NZ09 502 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 IFT80Q9P2H3 777 aaPredicted RBP8.8□□□□□ -1
PDLIM5-223ENST00000627587 TMEFF2Q9UIK5 374 aaPredicted RBP8.8□□□□□ -1
PDLIM5-223ENST00000627587 KCNE5Q9UJ90 142 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 FAM32AQ9Y421 112 aaKnown RBP8.8□□□□□ -1
PDLIM5-223ENST00000627587 B3GALT1Q9Y5Z6 326 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 HECTD1Q9ULT8 2610 aa8.8□□□□□ -1
PDLIM5-223ENST00000627587 EXPH5Q8NEV8 1989 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 TCRBV16S1A1N1A0A5B0 115 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 GXYLT2A0PJZ3 443 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 SYNDIG1LA6NDD5 238 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 POLR1CO15160 346 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 CNOT3O75175 753 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 NKX2-2O95096 273 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 SNAP29O95721 258 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 ONECUT2O95948 504 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 ALPPP05187 535 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 FGF5P12034 268 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 LIFP15018 202 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 FPR1P21462 350 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 DNAJA1P31689 397 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 YAP1P46937 504 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 LIMS1P48059 325 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 ALDH3A2P51648 485 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 FOXK1P85037 733 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 PLAURQ03405 335 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 OCA2Q04671 838 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 DAG1Q14118 895 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 NKAIN1Q4KMZ8 207 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 DCST2Q5T1A1 773 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 SHQ1Q6PI26 577 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 NPSR1Q6W5P4 371 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 ZAR1Q86SH2 424 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 CHERPQ8IWX8 916 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 NLGN4XQ8N0W4 816 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 NLGN4YQ8NFZ3 816 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 OR4C15Q8NGM1 316 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 TFAP2CQ92754 450 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 LMF2Q9BU23 707 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 SPRY4Q9C004 299 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 TGIF2Q9GZN2 237 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 VN1R1Q9GZP7 353 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 ZNF350Q9GZX5 532 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 SOX17Q9H6I2 414 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 AKIRIN1Q9H9L7 192 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 MKLN1Q9UL63 735 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 MKL2Q9ULH7 1088 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 ERVK-19Q9WJR5 959 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 SAMHD1Q9Y3Z3 626 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 WDR45Q9Y484 360 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 LYVE1Q9Y5Y7 322 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 C17orf105B2RV13 164 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 HPRP00739 348 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 IGKV1D-16P01601 117 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 IGKV3-11P04433 115 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 GNAO1P09471 354 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 PABPC4LP0CB38 370 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 CT45A8P0DMV1 189 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 CT45A9P0DMV2 189 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 GP1BBP13224 206 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 ZNF28P17035 718 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 RHCEP18577 417 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 RPS4Y1P22090 263 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 RRM2P31350 389 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 GABRA3P34903 492 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 POU6F2P78424 691 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 DCDP81605 110 aaKnown RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 NSDHLQ15738 373 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 NPTX1Q15818 432 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 CT45A2Q5DJT8 189 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 ZNF311Q5JNZ3 666 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 TCTN3Q6NUS6 607 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 CYP4Z1Q86W10 505 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 VRK2Q86Y07 508 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 PEX5LQ8IYB4 626 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 PRSS58Q8IYP2 241 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 MARVELD2Q8N4S9 558 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 OR4N2Q8NGD1 307 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 C16orf52Q8NHV5 167 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 C9orf43Q8TAL5 461 aaPredicted RBP8.79□□□□□ -1
PDLIM5-223ENST00000627587 NRBF2Q96F24 287 aa8.79□□□□□ -1
PDLIM5-223ENST00000627587 CTRCQ99895 268 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms