RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 TMEM255BQ8WV15 326 aa18.33■□□□□ 0.52
PCDHB11-202ENST00000624887 ZNF582Q96NG8 517 aaPredicted RBP18.33■□□□□ 0.52
PCDHB11-202ENST00000624887 SLC38A3Q99624 504 aa18.33■□□□□ 0.52
PCDHB11-202ENST00000624887 OR51E2Q9H255 320 aa18.33■□□□□ 0.52
PCDHB11-202ENST00000624887 ARMC7Q9H6L4 198 aa18.33■□□□□ 0.52
PCDHB11-202ENST00000624887 POLE3Q9NRF9 147 aa18.33■□□□□ 0.52
PCDHB11-202ENST00000624887 RHBDL2Q9NX52 303 aa18.33■□□□□ 0.52
PCDHB11-202ENST00000624887 SLC7A7Q9UM01 511 aa18.33■□□□□ 0.52
PCDHB11-202ENST00000624887 CDHR4A6H8M9 788 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 CCRL2O00421 344 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 PEX12O00623 359 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 BRINP1O60477 761 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 STARD6P59095 220 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 NR1D2Q14995 579 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 TSTQ16762 297 aaKnown RBP18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 MRPL2Q5T653 305 aaKnown RBP18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 NIPAL1Q6NVV3 410 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 C17orf82Q86X59 251 aaPredicted RBP18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 NRMQ8IXM6 262 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 SLC34A3Q8N130 599 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 TMEM163Q8TC26 289 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 SHDQ96IW2 340 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 TAPBPLQ9BX59 468 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 RACGAP1Q9H0H5 632 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 IL20Q9NYY1 176 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 NLGN3Q9NZ94 848 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 TESQ9UGI8 421 aaKnown RBP18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 FBXL21Q9UKT6 434 aa18.32■□□□□ 0.52
PCDHB11-202ENST00000624887 GXYLT2A0PJZ3 443 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 S1PR1P21453 382 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 ZNF155Q12901 538 aaPredicted RBP18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 DOC2BQ14184 412 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 FIGNL1Q6PIW4 674 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 IGFN1Q86VF2 1251 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 ATCAYQ86WG3 371 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 TMCO5AQ8N6Q1 288 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 POGLUT1Q8NBL1 392 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 OSTF1Q92882 214 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 ZNF285Q96NJ3 590 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 DACH2Q96NX9 599 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 SLC38A2Q96QD8 506 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 MND1Q9BWT6 205 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 RBCK1Q9BYM8 510 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 PRRG3Q9BZD7 231 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 FOXQ1Q9C009 403 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 HCN3Q9P1Z3 774 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 CLEC2DQ9UHP7 191 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 LOC100506127A0A0U1RQW1 187 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 BLACEA4D250 179 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 TRAPPC13A5PLN9 417 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 ARHGAP33O14559 1287 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 SCG5P05408 212 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 ZNF12P17014 697 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 ZP2Q05996 745 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 SLC13A2Q13183 592 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 FAM53BQ14153 422 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 TIMM50Q3ZCQ8 353 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 GALNT12Q8IXK2 581 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 NANOGP1Q8N7R0 232 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 PROKR2Q8NFJ6 384 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 KBTBD8Q8NFY9 601 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 OPALINQ96PE5 141 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 PRDM6Q9NQX0 595 aa18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 MRPS18AQ9NVS2 196 aaKnown RBP18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 DIMT1Q9UNQ2 313 aaKnown RBP18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 MRPS33Q9Y291 106 aaKnown RBP18.31■□□□□ 0.52
PCDHB11-202ENST00000624887 THADAQ6YHU6 1953 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 NPIPA5A0A0B4J1W7 369 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 NPIPA7E9PJI5 369 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 FMO6PO60774 539 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 CTNSO60931 367 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 CSO75390 466 aaKnown RBP18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 NPIPA8P0DM63 369 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 CKMT1AP12532 417 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 PRG2P13727 222 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 HTR2AP28223 471 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 GPR4P46093 362 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 GABRA4P48169 554 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 SPHARQ15513 63 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 SSX1Q16384 188 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 SLC36A4Q6YBV0 504 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 ZNF595Q8IYB9 648 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 CACTIN-AS1Q8N1I8 211 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 ADAMTS18Q8TE60 1221 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 PRSS27Q9BQR3 290 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 CHCHD6Q9BRQ6 235 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 LMF2Q9BU23 707 aaKnown RBP18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 CENPOQ9BU64 300 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 KRCC1Q9NPI7 259 aaPredicted RBP18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 hCG_2014768A0A024R1R8 64 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 HYKKA2RU49 373 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 SNTNA6NMZ2 147 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 PRODHO43272 600 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 AQP9O43315 295 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 PIP5K1CO60331 668 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 KCNK2O95069 426 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 NSA2O95478 260 aaKnown RBP18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 RAB36O95755 333 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 GKN3PP0CG01 181 aa18.3■□□□□ 0.52
PCDHB11-202ENST00000624887 GNSP15586 552 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms