RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 DNAJB7Q7Z6W7 309 aaPredicted RBP14.24□□□□□ -0.13
PMS1-221ENST00000624204 PAQR7Q86WK9 346 aa14.24□□□□□ -0.13
PMS1-221ENST00000624204 RELL2Q8NC24 303 aaPredicted RBP14.24□□□□□ -0.13
PMS1-221ENST00000624204 RFKQ969G6 155 aa14.24□□□□□ -0.13
PMS1-221ENST00000624204 GIMAP5Q96F15 307 aa14.24□□□□□ -0.13
PMS1-221ENST00000624204 ORAI3Q9BRQ5 295 aa14.24□□□□□ -0.13
PMS1-221ENST00000624204 LRRN3Q9H3W5 708 aa14.24□□□□□ -0.13
PMS1-221ENST00000624204 ZNF768Q9H5H4 540 aaKnown RBP14.24□□□□□ -0.13
PMS1-221ENST00000624204 MED20Q9H944 212 aa14.24□□□□□ -0.13
PMS1-221ENST00000624204 ASB6Q9NWX5 421 aa14.24□□□□□ -0.13
PMS1-221ENST00000624204 WSB2Q9NYS7 404 aaPredicted RBP14.24□□□□□ -0.13
PMS1-221ENST00000624204 CYB5R1Q9UHQ9 305 aa14.24□□□□□ -0.13
PMS1-221ENST00000624204 RCE1Q9Y256 329 aa14.24□□□□□ -0.13
PMS1-221ENST00000624204 TP53BP1Q12888 1972 aaPredicted RBP14.23□□□□□ -0.13
PMS1-221ENST00000624204 C5orf42Q9H799 3197 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 CHD5Q8TDI0 1954 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 GLOD5A6NK44 160 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 UBXN7O94888 489 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 SLC2A10O95528 541 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 UQCRC2P22695 453 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 KCNJ5P48544 419 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 CNTN1Q12860 1018 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 SLBPQ14493 270 aaKnown RBP eCLIP14.23□□□□□ -0.13
PMS1-221ENST00000624204 NDUFA9Q16795 377 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 HIST2H2AA3Q6FI13 130 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 PDZD9Q8IXQ8 264 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 OR4D9Q8NGE8 314 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 DOK4Q8TEW6 326 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 CXorf40BQ96DE9 158 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 FAM46AQ96IP4 442 aaKnown RBP14.23□□□□□ -0.13
PMS1-221ENST00000624204 NRTNQ99748 197 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 OR51I1Q9H343 314 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 ZCCHC4Q9H5U6 513 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 STOX2Q9P2F5 926 aaPredicted RBP14.23□□□□□ -0.13
PMS1-221ENST00000624204 OR6C74A6NCV1 312 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 TMEM202A6NGA9 273 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 FAM170BA6NMN3 283 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 DNASE2O00115 360 aaPredicted RBP14.23□□□□□ -0.13
PMS1-221ENST00000624204 AIPO00170 330 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 SOCS6O14544 535 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 SPDEFO95238 335 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 NR2F1P10589 423 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 GNSP15586 552 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 PAICSP22234 425 aaKnown RBP14.23□□□□□ -0.13
PMS1-221ENST00000624204 SYTL3Q4VX76 610 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 ZNF740Q8NDX6 193 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 OR6T1Q8NGN1 323 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 THAP4Q8WY91 577 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 UPF1Q92900 1129 aaKnown RBP eCLIP14.23□□□□□ -0.13
PMS1-221ENST00000624204 MS4A4AQ96JQ5 239 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 SLC38A3Q99624 504 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 TREX2Q9BQ50 279 aaPredicted RBP14.23□□□□□ -0.13
PMS1-221ENST00000624204 FAIM2Q9BWQ8 316 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 ACTR6Q9GZN1 396 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 EVA1AQ9H8M9 152 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 EQTNQ9NQ60 294 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 ACTR10Q9NZ32 417 aa14.23□□□□□ -0.13
PMS1-221ENST00000624204 OR5K4A6NMS3 321 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 SDC3O75056 442 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 MAOBP27338 520 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 THBS2P35442 1172 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 GDNFP39905 211 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 STXBP1P61764 594 aaKnown RBP14.22□□□□□ -0.13
PMS1-221ENST00000624204 AP1S1P61966 158 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 SCRN3Q0VDG4 424 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 MRPL58Q14197 206 aaKnown RBP14.22□□□□□ -0.13
PMS1-221ENST00000624204 HLXQ14774 488 aaPredicted RBP14.22□□□□□ -0.13
PMS1-221ENST00000624204 SLC25A30Q5SVS4 291 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 IKBIPQ70UQ0 350 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 LINGO2Q7L985 606 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 OR13C5Q8NGS8 318 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 ING5Q8WYH8 240 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 DNAJC5Q9H3Z4 198 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 MTG2Q9H4K7 406 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 NLRC5Q86WI3 1866 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 GLAP06280 429 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 RAD52P43351 418 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 ELP2Q6IA86 826 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 CRTC1Q6UUV9 634 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 NHLRC1Q6VVB1 395 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 RPTNQ6XPR3 784 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 SCARB1Q8WTV0 552 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 GAL3ST1Q99999 423 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 TDP1Q9NUW8 608 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 MRPS18AQ9NVS2 196 aaKnown RBP14.22□□□□□ -0.13
PMS1-221ENST00000624204 A0A1W2PRQ8 180 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 MCRIP1C9JLW8 97 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 REM1O75628 298 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 FGF2P09038 288 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 ATP1B2P14415 290 aaPredicted RBP14.22□□□□□ -0.13
PMS1-221ENST00000624204 TBXA2RP21731 343 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 CCND3P30281 292 aaPredicted RBP14.22□□□□□ -0.13
PMS1-221ENST00000624204 S100A11P31949 105 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 TRIM23P36406 574 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 SLC22A10Q63ZE4 541 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 C6orf120Q7Z4R8 191 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 ZNF671Q8TAW3 534 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 ZDHHC1Q8WTX9 485 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 WNT2BQ93097 391 aa14.22□□□□□ -0.13
PMS1-221ENST00000624204 GINS4Q9BRT9 223 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms