RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ENKD1Q9H0I2 346 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 A0A1W2PR48 441 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 A0A1W2PR77 199 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 C21orf140B9A014 251 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 ARPC2O15144 300 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 RPP14O95059 124 aaKnown RBP8.46□□□□□ -1.05
HDAC9-229ENST00000622668 PRDX6P30041 224 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 PIGAP37287 484 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 SLC15A1P46059 708 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 RPS6KA3P51812 740 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 LCN1P1Q5VSP4 162 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 FBXO42Q6P3S6 717 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 KRT77Q7Z794 578 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 ZNF433Q8N7K0 673 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-229ENST00000622668 RORBQ92753 470 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 TM4SF18Q96CE8 201 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 METTL2AQ96IZ6 378 aaKnown RBP8.46□□□□□ -1.05
HDAC9-229ENST00000622668 PIGQQ9BRB3 760 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 PINK1Q9BXM7 581 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 ACSS1Q9NUB1 689 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-229ENST00000622668 CKLFQ9UBR5 152 aa8.46□□□□□ -1.05
HDAC9-229ENST00000622668 TECTAO75443 2155 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 OR2A25A4D2G3 310 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 SLC30A4O14863 429 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 SPARCP09486 303 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 MSL3P1P0C860 447 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 RAP2AP10114 183 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 MMP11P24347 488 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 GMFBP60983 142 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 CA13Q8N1Q1 262 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 OR5M1Q8NGP8 315 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 TRIB1Q96RU8 372 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 ORAI3Q9BRQ5 295 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 OTOGLQ3ZCN5 2332 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 C19orf67A6NJJ6 358 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 M0R3H8 397 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 PSMD9O00233 223 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 SLC22A2O15244 555 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 TMPRSS11DO60235 418 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 UTS2O95399 124 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 CD2P06729 351 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 ANXA8P13928 327 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 ACADVLP49748 655 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 CARD18P57730 90 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 RASGEF1BQ0VAM2 473 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 MED22Q15528 200 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 NEDD8Q15843 81 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 SYPL1Q16563 259 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 CLPPQ16740 277 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-229ENST00000622668 SMU1Q2TAY7 513 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 ZNF687Q8N1G0 1237 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 SYT14Q8NB59 555 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 AQP11Q8NBQ7 271 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 ABHD11Q8NFV4 315 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 RFKQ969G6 155 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 C3orf30Q96M34 536 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 ADAD1Q96M93 576 aaKnown RBP8.46□□□□□ -1.06
HDAC9-229ENST00000622668 GLIPR2Q9H4G4 154 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 PLGRKTQ9HBL7 147 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 AMBNQ9NP70 447 aa8.46□□□□□ -1.06
HDAC9-229ENST00000622668 PRR23D1E9PI22 279 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-229ENST00000622668 KRT36O76013 467 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 ANGPTL1O95841 491 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 PRR23D2P0DMB1 279 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-229ENST00000622668 HOXA6P31267 233 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 ATP12AP54707 1039 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 RUNX2Q13950 521 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 IHHQ14623 411 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 ODF4Q2M2E3 257 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 GGTA1PQ4G0N0 100 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 B3GNTL1Q67FW5 361 aaPredicted RBP8.45□□□□□ -1.06
HDAC9-229ENST00000622668 BLOC1S3Q6QNY0 202 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 MARCH3Q86UD3 253 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 FAM86B1Q8N7N1 296 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 ANKFN1Q8N957 763 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 SLC16A11Q8NCK7 471 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 SLC45A3Q96JT2 553 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 C19orf43Q9BQ61 176 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 DGCR6LQ9BY27 220 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.45□□□□□ -1.06
HDAC9-229ENST00000622668 RAXQ9Y2V3 346 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 ZNF451Q9Y4E5 1061 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 SPEF1Q9Y4P9 236 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 MDC1Q14676 2089 aaKnown RBP8.45□□□□□ -1.06
HDAC9-229ENST00000622668 IGLV3-16A0A075B6K0 115 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 LOC100506127A0A0U1RQW1 187 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 SMIM31A0A1B0GVY4 71 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 FAM90A27PA6NNH2 459 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 ARNTLO00327 626 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 RNASET2O00584 256 aaKnown RBP8.45□□□□□ -1.06
HDAC9-229ENST00000622668 FADS2O95864 444 aaKnown RBP8.45□□□□□ -1.06
HDAC9-229ENST00000622668 SERPINA7P05543 415 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 GSTM3P21266 225 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 SLC34A1Q06495 639 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 GAB4Q2WGN9 574 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 OR2T5Q6IEZ7 315 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 ARL9Q6T311 187 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 TMPRSS11AQ6ZMR5 421 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 PRSS41Q7RTY9 318 aa8.45□□□□□ -1.06
HDAC9-229ENST00000622668 NET1Q7Z628 596 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms