RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 HS3ST6Q96QI5 342 aa8.38□□□□□ -1.07
TARDBP-227ENST00000622057 LMF2Q9BU23 707 aaKnown RBP8.38□□□□□ -1.07
TARDBP-227ENST00000622057 BDH2Q9BUT1 245 aa8.38□□□□□ -1.07
TARDBP-227ENST00000622057 SHCBP1LQ9BZQ2 653 aa8.38□□□□□ -1.07
TARDBP-227ENST00000622057 EQTNQ9NQ60 294 aa8.38□□□□□ -1.07
TARDBP-227ENST00000622057 RRAGDQ9NQL2 400 aaPredicted RBP8.38□□□□□ -1.07
TARDBP-227ENST00000622057 FAM120CQ9NX05 1096 aaKnown RBP8.38□□□□□ -1.07
TARDBP-227ENST00000622057 TAS2R7Q9NYW3 318 aa8.38□□□□□ -1.07
TARDBP-227ENST00000622057 ABCG2Q9UNQ0 655 aa8.38□□□□□ -1.07
TARDBP-227ENST00000622057 ZNF175Q9Y473 711 aa8.38□□□□□ -1.07
TARDBP-227ENST00000622057 AP4B1Q9Y6B7 739 aa8.38□□□□□ -1.07
TARDBP-227ENST00000622057 EXPH5Q8NEV8 1989 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 HRNRQ86YZ3 2850 aaPredicted RBP8.37□□□□□ -1.07
TARDBP-227ENST00000622057 NIPBLQ6KC79 2804 aaeCLIP8.37□□□□□ -1.07
TARDBP-227ENST00000622057 A0A1W2PPM1 405 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 NDUFB5O43674 189 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 SEC22BO75396 215 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 RSL1D1O76021 490 aaKnown RBP8.37□□□□□ -1.07
TARDBP-227ENST00000622057 AQP8O94778 261 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 IGKV1D-16P01601 117 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 ABHD2P08910 425 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 MYL2P10916 166 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 PCSK6P29122 969 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 SLC6A8P48029 635 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 PCYT1AP49585 367 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 CTBP2P56545 445 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 PRR5P85299 388 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 FGFBP1Q14512 234 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 SLC29A2Q14542 456 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 GRAMD1BQ3KR37 738 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 CFAP157Q5JU67 520 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 ALKBH2Q6NS38 261 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 ANKRD26P1Q6NSI1 321 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 FIGNL1Q6PIW4 674 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 TRMT10CQ7L0Y3 403 aaKnown RBP8.37□□□□□ -1.07
TARDBP-227ENST00000622057 SZRD1Q7Z422 152 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 TRIM46Q7Z4K8 759 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 IFT20Q8IY31 132 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 METTL25Q8N6Q8 603 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 CEP112Q8N8E3 955 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 CCDC63Q8NA47 563 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 GATSQ8NAP1 163 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 NUP43Q8NFH3 380 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 FAM76AQ8TAV0 307 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.37□□□□□ -1.072e-21■■□□□ 12.4
TARDBP-227ENST00000622057 ACMSDQ8TDX5 336 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 ARSGQ96EG1 525 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 MYNNQ9NPC7 610 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 PLSCR4Q9NRQ2 329 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 SH3BP4Q9P0V3 963 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 PSMC3IPQ9P2W1 217 aaPredicted RBP8.37□□□□□ -1.07
TARDBP-227ENST00000622057 STOML1Q9UBI4 398 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 WBP11Q9Y2W2 641 aaKnown RBP8.37□□□□□ -1.07
TARDBP-227ENST00000622057 EMC9Q9Y3B6 208 aa8.37□□□□□ -1.07
TARDBP-227ENST00000622057 NAV3Q8IVL0 2385 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 TRIM64A6NGJ6 449 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 TRIM64BA6NI03 449 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 TTC36A6NLP5 189 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 G3V2L1 256 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 AKAP10O43572 662 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 CXCL13O43927 109 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 GLRA3O75311 464 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 PSMG1O95456 288 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 SYNGR4O95473 234 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 THBDP07204 575 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 UROSP10746 265 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 CCKARP32238 428 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 MANFP55145 182 aaKnown RBP8.36□□□□□ -1.07
TARDBP-227ENST00000622057 KIAA0040Q15053 153 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 PRSS57Q6UWY2 283 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 ZYG11AQ6WRX3 759 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 C20orf204Q6ZNR8 217 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 PLEKHM3Q6ZWE6 761 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 IKBIPQ70UQ0 350 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 GGNQ86UU5 652 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 WDR75Q8IWA0 830 aaKnown RBP8.36□□□□□ -1.07
TARDBP-227ENST00000622057 OR4C3Q8NH37 302 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 OR10D3Q8NH80 312 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 CEP70Q8NHQ1 597 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 FBXO30Q8TB52 745 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 CIDECQ96AQ7 238 aaPredicted RBP8.36□□□□□ -1.07
TARDBP-227ENST00000622057 COX4I2Q96KJ9 171 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 NPAS1Q99742 590 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 C12orf65Q9H3J6 166 aaKnown RBP8.36□□□□□ -1.07
TARDBP-227ENST00000622057 TNFRSF12AQ9NP84 129 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 EMCNQ9ULC0 261 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 MCTS1Q9ULC4 181 aaKnown RBP8.36□□□□□ -1.07
TARDBP-227ENST00000622057 FIS1Q9Y3D6 152 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 MED12LQ86YW9 2145 aa8.36□□□□□ -1.07
TARDBP-227ENST00000622057 IGLV3-32A0A0A0MS00 114 aa8.35□□□□□ -1.07
TARDBP-227ENST00000622057 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.35□□□□□ -1.07
TARDBP-227ENST00000622057 ALG1L2C9J202 215 aa8.35□□□□□ -1.07
TARDBP-227ENST00000622057 H3BQF6 201 aa8.35□□□□□ -1.07
TARDBP-227ENST00000622057 SLC28A1O00337 649 aa8.35□□□□□ -1.07
TARDBP-227ENST00000622057 TNFSF11O14788 317 aa8.35□□□□□ -1.07
TARDBP-227ENST00000622057 PDPK1O15530 556 aa8.35□□□□□ -1.07
TARDBP-227ENST00000622057 KLF4O43474 513 aa8.35□□□□□ -1.07
TARDBP-227ENST00000622057 RGS14O43566 566 aa8.35□□□□□ -1.07
TARDBP-227ENST00000622057 NKX2-2O95096 273 aa8.35□□□□□ -1.07
TARDBP-227ENST00000622057 OXSR1O95747 527 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms