RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 GATAD2BQ8WXI9 593 aa8.79□□□□□ -1
PDPN-212ENST00000621990 HOXB13Q92826 284 aaPredicted RBP8.79□□□□□ -1
PDPN-212ENST00000621990 PMM1Q92871 262 aa8.79□□□□□ -1
PDPN-212ENST00000621990 STACQ99469 402 aa8.79□□□□□ -1
PDPN-212ENST00000621990 COQ7Q99807 217 aa8.79□□□□□ -1
PDPN-212ENST00000621990 TEX12Q9BXU0 123 aa8.79□□□□□ -1
PDPN-212ENST00000621990 NPAP1Q9NZP6 1156 aa8.79□□□□□ -1
PDPN-212ENST00000621990 ZNF223Q9UK11 482 aaPredicted RBP8.79□□□□□ -1
PDPN-212ENST00000621990 PCDHGB2Q9Y5G2 931 aa8.79□□□□□ -1
PDPN-212ENST00000621990 TRDV1A0A1B0GX56 115 aa8.78□□□□□ -1
PDPN-212ENST00000621990 FAM221BA6H8Z2 402 aa8.78□□□□□ -1
PDPN-212ENST00000621990 CDC42EP2O14613 210 aa8.78□□□□□ -1
PDPN-212ENST00000621990 SLC30A4O14863 429 aa8.78□□□□□ -1
PDPN-212ENST00000621990 DBIP07108 87 aaKnown RBP8.78□□□□□ -1
PDPN-212ENST00000621990 GPR4P46093 362 aa8.78□□□□□ -1
PDPN-212ENST00000621990 SRP54P61011 504 aaKnown RBP8.78□□□□□ -1
PDPN-212ENST00000621990 ZNF155Q12901 538 aaPredicted RBP8.78□□□□□ -1
PDPN-212ENST00000621990 HTR4Q13639 388 aa8.78□□□□□ -1
PDPN-212ENST00000621990 DSG2Q14126 1118 aa8.78□□□□□ -1
PDPN-212ENST00000621990 ALG11Q2TAA5 492 aa8.78□□□□□ -1
PDPN-212ENST00000621990 C22orf42Q6IC83 251 aa8.78□□□□□ -1
PDPN-212ENST00000621990 RNF44Q7L0R7 432 aa8.78□□□□□ -1
PDPN-212ENST00000621990 RNF113BQ8IZP6 322 aaKnown RBP8.78□□□□□ -1
PDPN-212ENST00000621990 ZNF619Q8N2I2 560 aa8.78□□□□□ -1
PDPN-212ENST00000621990 OR52N1Q8NH53 320 aa8.78□□□□□ -1
PDPN-212ENST00000621990 BAHD1Q8TBE0 780 aaPredicted RBP8.78□□□□□ -1
PDPN-212ENST00000621990 EFHD2Q96C19 240 aaPredicted RBP8.78□□□□□ -1
PDPN-212ENST00000621990 ZFYVE21Q9BQ24 234 aa8.78□□□□□ -1
PDPN-212ENST00000621990 MIXL1Q9H2W2 232 aa8.78□□□□□ -1
PDPN-212ENST00000621990 KRCC1Q9NPI7 259 aaPredicted RBP8.78□□□□□ -1
PDPN-212ENST00000621990 CD93Q9NPY3 652 aa8.78□□□□□ -1
PDPN-212ENST00000621990 MUTYHQ9UIF7 546 aa8.78□□□□□ -1
PDPN-212ENST00000621990 CBLCQ9ULV8 474 aa8.78□□□□□ -1
PDPN-212ENST00000621990 SLC7A7Q9UM01 511 aa8.78□□□□□ -1
PDPN-212ENST00000621990 ENTPD2Q9Y5L3 495 aa8.78□□□□□ -1
PDPN-212ENST00000621990 LOC105369274A0A096LPK9 316 aa8.78□□□□□ -1
PDPN-212ENST00000621990 LOC102723532A0A0G2JNH3 316 aa8.78□□□□□ -1
PDPN-212ENST00000621990 CDHR4A6H8M9 788 aa8.78□□□□□ -1
PDPN-212ENST00000621990 CYR61O00622 381 aa8.78□□□□□ -1
PDPN-212ENST00000621990 PIP5K1CO60331 668 aa8.78□□□□□ -1
PDPN-212ENST00000621990 APOA1P02647 267 aa8.78□□□□□ -1
PDPN-212ENST00000621990 HMGN1P05114 100 aa8.78□□□□□ -1
PDPN-212ENST00000621990 NID1P14543 1247 aa8.78□□□□□ -1
PDPN-212ENST00000621990 NDUFV2P19404 249 aa8.78□□□□□ -1
PDPN-212ENST00000621990 GALP22466 123 aa8.78□□□□□ -1
PDPN-212ENST00000621990 HTR2AP28223 471 aa8.78□□□□□ -1
PDPN-212ENST00000621990 ACSL1P33121 698 aa8.78□□□□□ -1
PDPN-212ENST00000621990 TGM4P49221 684 aa8.78□□□□□ -1
PDPN-212ENST00000621990 FABP5Q01469 135 aa8.78□□□□□ -1
PDPN-212ENST00000621990 FZD5Q13467 585 aa8.78□□□□□ -1
PDPN-212ENST00000621990 TRMT12Q53H54 448 aaKnown RBP8.78□□□□□ -1
PDPN-212ENST00000621990 AKAP14Q86UN6 197 aa8.78□□□□□ -1
PDPN-212ENST00000621990 RANBP3LQ86VV4 465 aaPredicted RBP8.78□□□□□ -1
PDPN-212ENST00000621990 OR4N5Q8IXE1 308 aa8.78□□□□□ -1
PDPN-212ENST00000621990 OR4N4Q8N0Y3 316 aa8.78□□□□□ -1
PDPN-212ENST00000621990 ZCCHC10Q8TBK6 192 aa8.78□□□□□ -1
PDPN-212ENST00000621990 COL26A1Q96A83 441 aa8.78□□□□□ -1
PDPN-212ENST00000621990 KIAA1143Q96AT1 154 aaPredicted RBP8.78□□□□□ -1
PDPN-212ENST00000621990 KATNB1Q9BVA0 655 aa8.78□□□□□ -1
PDPN-212ENST00000621990 KLHL25Q9H0H3 589 aa8.78□□□□□ -1
PDPN-212ENST00000621990 MIR1-1HGQ9H1L0 117 aa8.78□□□□□ -1
PDPN-212ENST00000621990 NKX2-4Q9H2Z4 354 aa8.78□□□□□ -1
PDPN-212ENST00000621990 C14orf119Q9NWQ9 140 aa8.78□□□□□ -1
PDPN-212ENST00000621990 YARS2Q9Y2Z4 477 aaKnown RBP8.78□□□□□ -1
PDPN-212ENST00000621990 TRAPPC13A5PLN9 417 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 OR6C74A6NCV1 312 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 RGS5O15539 181 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 STX11O75558 287 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 APOL3O95236 402 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 RASGRP1O95267 797 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 ZGLP1P0C6A0 271 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 SDC2P34741 201 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 CD79BP40259 229 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 TPTEP56180 551 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 UBE2IP63279 158 aaKnown RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 MRPS21P82921 87 aaKnown RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 MGAT2Q10469 447 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 HNRNPA0Q13151 305 aaKnown RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 ADAM15Q13444 863 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 MAPK14Q16539 360 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 LRIT3Q3SXY7 679 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 DCST2Q5T1A1 773 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 RD3Q7Z3Z2 195 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 CDRT4Q8N9R6 151 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 PSD4Q8NDX1 1056 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 GPBAR1Q8TDU6 330 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 FAM3CQ92520 227 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 TMEM203Q969S6 136 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 CTHRC1Q96CG8 243 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 CACYBPQ9HB71 228 aaKnown RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 POT1Q9NUX5 634 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 EVA1BQ9NVM1 165 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 KCNE5Q9UJ90 142 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 MRPS2Q9Y399 296 aaKnown RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 F5P12259 2224 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 ARHGEF17Q96PE2 2063 aaPredicted RBP8.77□□□□□ -1.01
PDPN-212ENST00000621990 H0YGG7 62 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 CHST10O43529 356 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 DYRK3O43781 588 aa8.77□□□□□ -1.01
PDPN-212ENST00000621990 SSX4O60224 188 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms