RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SPATA19Q7Z5L4 167 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 IFNEQ86WN2 208 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 LRRC34Q8IZ02 419 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 FADS6Q8N9I5 356 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 OR7A2PQ8NGA2 310 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 CEP70Q8NHQ1 597 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 ZPLD1Q8TCW7 415 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 GIMAP5Q96F15 307 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 TUBA1CQ9BQE3 449 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 DSN1Q9H410 356 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 AKTIPQ9H8T0 292 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 CALHM2Q9HA72 323 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 PPP4R1LQ9P1A2 415 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 DKKL1Q9UK85 242 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 TRIM33Q9UPN9 1127 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 MRPS18CQ9Y3D5 142 aaKnown RBP16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 MPDZO75970 2070 aa16.29■□□□□ 0.2
SCAMP4-213ENST00000621748 SPG11Q96JI7 2443 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 OTOGQ6ZRI0 2925 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 A0A0G2JND7 137 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 GOLGA8QA0A0J9YX86 632 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 GOLGA8OA6NCC3 632 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 MBD3L4A6NDZ8 208 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 MBD3L3A6NE82 208 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 MBD3L5A6NJ08 208 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 TTC36A6NLP5 189 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 GOLGA8NF8WBI6 632 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 SCAMP2O15127 329 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 NKX2-2O95096 273 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 UTS2O95399 124 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 IL2RAP01589 272 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 LAMP1P11279 417 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 GCKP35557 465 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 LHX2P50458 406 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 STX5Q13190 355 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 IL23RQ5VWK5 629 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 ENPP6Q6UWR7 440 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 PLXDC2Q6UX71 529 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 APOOLQ6UXV4 268 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 MARCH3Q86UD3 253 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 OR2M3Q8NG83 312 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 OR4K17Q8NGC6 315 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 MBD3L2Q8NHZ7 208 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 GPR151Q8TDV0 419 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 THOC1Q96FV9 657 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 RMND5BQ96G75 393 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 C16orf58Q96GQ5 468 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 G6PC3Q9BUM1 346 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 FAM107BQ9H098 131 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 C3orf14Q9HBI5 128 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 MCCC2Q9HCC0 563 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 SIRT3Q9NTG7 399 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 FAM120CQ9NX05 1096 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 NOP53Q9NZM5 478 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 MED11Q9P086 117 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 DCTN4Q9UJW0 460 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 MRTO4Q9UKD2 239 aaKnown RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 ABCG2Q9UNQ0 655 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 RPH3AQ9Y2J0 694 aaPredicted RBP16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 CCDC168Q8NDH2 2452 aa16.28■□□□□ 0.2
SCAMP4-213ENST00000621748 ENO4A6NNW6 628 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 EMC8O43402 210 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 KCNH1O95259 989 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 ACP2P11117 423 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 EPHA3P29320 983 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 HPCAL1P37235 193 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 AGFG1P52594 562 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 ARFIP2P53365 341 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 PSMD4P55036 377 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 DSCR4P56555 118 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 B3GALT5-AS1P59052 145 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 STX1BP61266 288 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 EMX2Q04743 252 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 SNTB1Q13884 538 aaKnown RBP16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 RCAN2Q14206 197 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 MLC1Q15049 377 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 MFSD12Q6NUT3 480 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 EPGNQ6UW88 154 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 SZRD1Q7Z422 152 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 ADGRE4PQ86SQ3 457 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 GALNT10Q86SR1 603 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 KRTCAP2Q8N6L1 136 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 CDRT4Q8N9R6 151 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 C9orf106Q8NAJ2 232 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 SLC16A11Q8NCK7 471 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 FBXO30Q8TB52 745 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 ACTRT2Q8TDY3 377 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 DUSP19Q8WTR2 217 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 SLC9A6Q92581 669 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 SFXN2Q96NB2 322 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 MS4A4EQ96PG1 132 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 WDR55Q9H6Y2 383 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 TCF7L2Q9NQB0 619 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 SDHAF3Q9NRP4 125 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 ZNF629Q9UEG4 869 aaPredicted RBP16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 L3MBTL1Q9Y468 752 aa16.27■□□□□ 0.2
SCAMP4-213ENST00000621748 A0A1W2PRB8 838 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 H0Y3Z8 333 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 SYT5O00445 386 aa16.26■□□□□ 0.19
SCAMP4-213ENST00000621748 DVL2O14641 736 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms