RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 MAGEA5P43359 124 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 TDGF1P3P51864 188 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 GAS1P54826 345 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 HPCAP84074 193 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 RGNQ15493 299 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 GPR68Q15743 365 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 GPAT3Q53EU6 434 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 KRTCAP3Q53RY4 240 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 GKAP1Q5VSY0 366 aaPredicted RBP16.97■□□□□ 0.31
CIRBP-245ENST00000621399 FNDC7Q5VTL7 733 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 OR5M10Q6IEU7 315 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 BNC2Q6ZN30 1099 aaPredicted RBP16.97■□□□□ 0.31
CIRBP-245ENST00000621399 OLIG3Q7RTU3 272 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 FAM109AQ8N4B1 249 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 WDSUB1Q8N9V3 476 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 GALNT11Q8NCW6 608 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 RP9Q8TA86 221 aaKnown RBP16.97■□□□□ 0.31
CIRBP-245ENST00000621399 GPR137Q96N19 417 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 MYLK2Q9H1R3 596 aa16.97■□□□□ 0.31
CIRBP-245ENST00000621399 NPIPA5A0A0B4J1W7 369 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 EVPLLA8MZ36 301 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 NPIPA7E9PJI5 369 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 MRASO14807 208 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 CDC40O60508 579 aaKnown RBP eCLIP16.96■□□□□ 0.31
CIRBP-245ENST00000621399 PDE9AO76083 593 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 ANGPTL1O95841 491 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 NPIPA8P0DM63 369 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 NR2F1P10589 423 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 PLA2G2AP14555 144 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 GDF1P27539 372 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 DCTP40126 519 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 ATP12AP54707 1039 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 DSTNP60981 165 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 FUT5Q11128 374 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 SLC10A1Q14973 349 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 RUNDC3AQ59EK9 446 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 CMPK2Q5EBM0 449 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 COQ5Q5HYK3 327 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 REP15Q6BDI9 236 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 GFRALQ6UXV0 394 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 APOOLQ6UXV4 268 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 PLCZ1Q86YW0 608 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 POU5F2Q8N7G0 328 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 ANKFN1Q8N957 763 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 ZNF527Q8NB42 609 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 ST6GALNAC3Q8NDV1 305 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 TRNT1Q96Q11 434 aaKnown RBP16.96■□□□□ 0.31
CIRBP-245ENST00000621399 CGREF1Q99674 301 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 RTN4RQ9BZR6 473 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 ZNF350Q9GZX5 532 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 ZNF703Q9H7S9 590 aaPredicted RBP16.96■□□□□ 0.31
CIRBP-245ENST00000621399 ZDHHC11Q9H8X9 412 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 POLE3Q9NRF9 147 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 THUMPD1Q9NXG2 353 aaKnown RBP16.96■□□□□ 0.31
CIRBP-245ENST00000621399 PPP4R1LQ9P1A2 415 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 P2RX2Q9UBL9 471 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 MKLN1Q9UL63 735 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 CORO2BQ9UQ03 480 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 C15orf41Q9Y2V0 281 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 WDR45Q9Y484 360 aa16.96■□□□□ 0.31
CIRBP-245ENST00000621399 PRAMEF27A3QJZ7 478 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 ALG1L2C9J202 215 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 PYCARD-AS1I3L0S3 204 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 NDUFB5O43674 189 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 CBR3O75828 277 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 TRAPPC6AO75865 159 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 ZIC2O95409 532 aaPredicted RBP16.95■□□□□ 0.3
CIRBP-245ENST00000621399 CBX6O95503 412 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 COX4I1P13073 169 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 C17orf67Q0P5P2 114 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 FADDQ13158 208 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 ELOAQ14241 798 aaKnown RBP16.95■□□□□ 0.3
CIRBP-245ENST00000621399 CAPRIN1Q14444 709 aaKnown RBP16.95■□□□□ 0.3
CIRBP-245ENST00000621399 TOMM20Q15388 145 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 SYPL1Q16563 259 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 TRMT5Q32P41 509 aaKnown RBP16.95■□□□□ 0.3
CIRBP-245ENST00000621399 TREML1Q86YW5 311 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 PCYOX1LQ8NBM8 494 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 DUSP19Q8WTR2 217 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 ANKRD27Q96NW4 1050 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 THUMPD3Q9BV44 507 aaKnown RBP16.95■□□□□ 0.3
CIRBP-245ENST00000621399 QPCTLQ9NXS2 382 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 GMEB1Q9Y692 573 aa16.95■□□□□ 0.3
CIRBP-245ENST00000621399 TMEM247A6NEH6 219 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 ANKUB1A6NFN9 424 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 C17orf51A8MQB3 221 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 H3BNH8 94 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 ADAM10O14672 748 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 DCTN3O75935 186 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 H6PDO95479 791 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 GUSBP08236 651 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 CELA3AP09093 270 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 NUDT7P0C024 238 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 TFPTP0C1Z6 253 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 KLHL26Q53HC5 615 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 TYW3Q6IPR3 259 aaKnown RBP16.94■□□□□ 0.3
CIRBP-245ENST00000621399 GHDCQ8N2G8 530 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 ZNF614Q8N883 585 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 GATSQ8NAP1 163 aa16.94■□□□□ 0.3
CIRBP-245ENST00000621399 OR4K17Q8NGC6 315 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms