RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 SERPINA3P01011 423 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 LDLRP01130 860 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 MT-ND4LP03901 98 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 MT-ND5P03915 603 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SLC35E2BP0CK96 405 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SLC35E2P0CK97 266 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 RD3LP0DJH9 198 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 CCNOP22674 350 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 S100A2P29034 98 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 MC4RP32245 332 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 GRK5P34947 590 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 CAMLGP49069 296 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 CEBPDP49716 269 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 CDH11P55287 796 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 RAG2P55895 527 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 ISL1P61371 349 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SELENOTP62341 195 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 RPS6P62753 249 aaKnown RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 YWHAHQ04917 246 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 C2orf80Q0P641 193 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 PTP4A2Q12974 167 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 PDZK1IP1Q13113 114 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 DAG1Q14118 895 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SMAD1Q15797 465 aaKnown RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 DUOXA1Q1HG43 343 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 C5orf64Q2M2E5 130 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 KLHL22Q53GT1 634 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 TMEM67Q5HYA8 995 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 ZNF691Q5VV52 312 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 YOD1Q5VVQ6 348 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 GLYATQ6IB77 296 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 CXorf57Q6NSI4 855 aaKnown RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 KLHL17Q6TDP4 642 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 TIFABQ6ZNK6 161 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SLC29A4Q7RTT9 530 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 PLPPR4Q7Z2D5 763 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 ADAT2Q7Z6V5 191 aaKnown RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 ADGRA1Q86SQ6 560 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 PTOV1Q86YD1 416 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 C10orf107Q8IVU9 208 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 FAM126BQ8IXS8 530 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 ADGRF3Q8IZF5 1079 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 C12orf76Q8N812 135 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 ZNF707Q96C28 371 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 RCN3Q96D15 328 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 FAM120BQ96EK7 910 aaKnown RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 SMIM12Q96EX1 92 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 TSPAN17Q96FV3 270 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 TSNAXQ99598 290 aaKnown RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 ALG8Q9BVK2 526 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SPATC1LQ9H0A9 340 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 MED28Q9H204 178 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 ZBTB20Q9HC78 741 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 ZBTB26Q9HCK0 441 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 MKKSQ9NPJ1 570 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 SOHLH2Q9NX45 425 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SMPD4Q9NXE4 827 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 NDOR1Q9UHB4 597 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SLC35A3Q9Y2D2 325 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 PCDHB14Q9Y5E9 798 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SGK494L7N484 410 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 VAMP5O95183 116 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 IFNA21P01568 189 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SCGB1A1P11684 91 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 TYRP14679 529 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 PGAM1P18669 254 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 HOXA13P31271 388 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 MAS1LP35410 378 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 IFNGR2P38484 337 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 KCNJ1P48048 391 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 LUMP51884 338 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 NAPAP54920 295 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 GRM3Q14832 879 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 BSXQ3C1V8 233 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 USP17L6PQ6QN14 398 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 C19orf48Q6RUI8 117 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 TMPRSS11AQ6ZMR5 421 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 HFE2Q6ZVN8 426 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 THNSL2Q86YJ6 484 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 CMTR2Q8IYT2 770 aaKnown RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 ZFP82Q8N141 532 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 THAP6Q8TBB0 222 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 CANT1Q8WVQ1 401 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 ALKBH3Q96Q83 286 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 RNF2Q99496 336 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 ACO2Q99798 780 aaKnown RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 APOL6Q9BWW8 343 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 LGR4Q9BXB1 951 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SNHG12Q9BXW3 62 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 ADAM19Q9H013 955 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 MYNNQ9NPC7 610 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 ZNF701Q9NV72 531 aaPredicted RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 FAM118AQ9NWS6 357 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SLC17A6Q9P2U8 582 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 KCND3Q9UK17 655 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 NDRG4Q9ULP0 352 aaKnown RBP4.79□□□□□ -1.64
MATR3-228ENST00000620916 ST3GAL5Q9UNP4 418 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 SPACA6W5XKT8 324 aa4.79□□□□□ -1.64
MATR3-228ENST00000620916 TRAPPC13A5PLN9 417 aa4.78□□□□□ -1.64
MATR3-228ENST00000620916 MYO1GB0I1T2 1018 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms