RNA–Protein interactions for RNA: ENST00000618327.4

CIITA-213, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CIITA, Length 4,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-213ENST00000618327 TMEM151AQ8N4L1 468 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 ZNF615Q8N8J6 731 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 DNAJA3Q96EY1 480 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 PRRC1Q96M27 445 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 SEC61A2Q9H9S3 476 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 WASH6PQ9NQA3 447 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 UPB1Q9UBR1 384 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 EXOSC1Q9Y3B2 195 aaKnown RBP13.02□□□□□ -0.32
CIITA-213ENST00000618327 MTCH2Q9Y6C9 303 aa13.02□□□□□ -0.32
CIITA-213ENST00000618327 SPTY2D1-AS1A0A0U1RR47 76 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 SLC1A7O00341 560 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 VILLO15195 856 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 CLPXO76031 633 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 SLITRK5O94991 958 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 CNR2P34972 360 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 LTB4RQ15722 352 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 ALKBH2Q6NS38 261 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 SMRP1Q8NCR6 262 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 AGBL5Q8NDL9 886 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 ABHD11Q8NFV4 315 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 OR2A1Q8NGT9 310 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 CST11Q9H112 138 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 HHATLQ9HCP6 504 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 SLC7A7Q9UM01 511 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 MED16Q9Y2X0 877 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 METTL12A8MUP2 240 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 ZNF670-ZNF695F2Z2N8 137 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 K7EQS6 105 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 LCMT2O60294 686 aaKnown RBP13.02□□□□□ -0.33
CIITA-213ENST00000618327 GREM1O60565 184 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 JRKO75564 520 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 GKN3PP0CG01 181 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 LRIF1Q5T3J3 769 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 TMEM184AQ6ZMB5 413 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 PHC2Q8IXK0 858 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 RBP7Q96R05 134 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 PLEKHA1Q9HB21 404 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 EP400Q96L91 3159 aa13.02□□□□□ -0.33
CIITA-213ENST00000618327 PLD2O14939 933 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 MT-ND2P03891 347 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 GNALP38405 381 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 MAGEA2P43356 314 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 TSPAN5P62079 268 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 HOXC5Q00444 222 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 CHRNEQ04844 493 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 COX20Q5RI15 118 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 IDNKQ5T6J7 187 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 GARNL3Q5VVW2 1013 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 VRK2Q86Y07 508 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 TCF7L1Q9HCS4 588 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 DHCR7Q9UBM7 475 aaKnown RBP13.01□□□□□ -0.33
CIITA-213ENST00000618327 WNT16Q9UBV4 365 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 RNF6Q9Y252 685 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 GXYLT2A0PJZ3 443 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 METTL21EPA6NDL7 271 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 SCRG1O75711 98 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 RPP14O95059 124 aaKnown RBP13.01□□□□□ -0.33
CIITA-213ENST00000618327 APOL3O95236 402 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 ADORA3P0DMS8 318 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 PEPDP12955 493 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 TUBA1BP68363 451 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 CBFBQ13951 182 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 PDSS1Q5T2R2 415 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 TUBA1AQ71U36 451 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 OR6N1Q8NGY5 312 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 CEP76Q8TAP6 659 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 TFAP2CQ92754 450 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 ZNF638Q14966 1978 aaKnown RBP13.01□□□□□ -0.33
CIITA-213ENST00000618327 A8MVJ9 347 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 HLA-DPB1P04440 258 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 FUT4P22083 530 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 EDNRAP25101 427 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 RBMS1P29558 406 aaKnown RBP13.01□□□□□ -0.33
CIITA-213ENST00000618327 GPLD1P80108 840 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 MARCH9Q86YJ5 346 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 LILRA2Q8N149 483 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 THEM6Q8WUY1 208 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 CBLCQ9ULV8 474 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 PTRH2Q9Y3E5 179 aaKnown RBP13.01□□□□□ -0.33
CIITA-213ENST00000618327 HSPB11Q9Y547 144 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 MAP1BP46821 2468 aaKnown RBP13.01□□□□□ -0.33
CIITA-213ENST00000618327 PTPRZ1P23471 2315 aaPredicted RBP13.01□□□□□ -0.33
CIITA-213ENST00000618327 ETHE1O95571 254 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 MAP2K4P45985 399 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 ZNF750Q32MQ0 723 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 TMEM225Q6GV28 225 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 YIPF7Q8N8F6 280 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 ZNF675Q8TD23 568 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 TMEM121BQ9BXQ6 578 aaPredicted RBP13.01□□□□□ -0.33
CIITA-213ENST00000618327 TBCCD1Q9NVR7 557 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 CNIH4Q9P003 139 aa13.01□□□□□ -0.33
CIITA-213ENST00000618327 RBMXL2O75526 392 aaKnown RBP13□□□□□ -0.33
CIITA-213ENST00000618327 PLGP00747 810 aaPredicted RBP13□□□□□ -0.33
CIITA-213ENST00000618327 PRH1P02810 166 aa13□□□□□ -0.33
CIITA-213ENST00000618327 STSP08842 583 aa13□□□□□ -0.33
CIITA-213ENST00000618327 FOLR3P41439 243 aa13□□□□□ -0.33
CIITA-213ENST00000618327 PPP3R1P63098 170 aa13□□□□□ -0.33
CIITA-213ENST00000618327 EIF5AP63241 154 aaKnown RBP13□□□□□ -0.33
CIITA-213ENST00000618327 MAB21L1Q13394 359 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms