RNA–Protein interactions for RNA: ENST00000617539.1

NEDD4L-237, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene NEDD4L, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-237ENST00000617539 EXOSC6Q5RKV6 272 aaKnown RBP20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 MFSD12Q6NUT3 480 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 CDRT4Q8N9R6 151 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 SLC16A11Q8NCK7 471 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 NUP43Q8NFH3 380 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 OR4C3Q8NH37 302 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 ZFP28Q8NHY6 868 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 AGR3Q8TD06 166 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 TCP10LQ8TDR4 215 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 AENQ8WTP8 325 aaKnown RBP20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 FIG4Q92562 907 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 C3orf30Q96M34 536 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 MS4A4EQ96PG1 132 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 FOXC2Q99958 501 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 TBL1XR1Q9BZK7 514 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 ACBD3Q9H3P7 528 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 PIGMQ9H3S5 423 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 SIRT3Q9NTG7 399 aaPredicted RBP20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 PACSIN3Q9UKS6 424 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 PLEKHA6Q9Y2H5 1048 aa20.04■□□□□ 0.8
NEDD4L-237ENST00000617539 SLC22A20A6NK97 555 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 SHISA8B8ZZ34 492 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 GMFGO60234 142 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 PSMD4P55036 377 aaKnown RBP20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 MANFP55145 182 aaKnown RBP20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 DUSP5Q16690 384 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 VWA1Q6PCB0 445 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 OR6Y1Q8NGX8 325 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 FAM110BQ8TC76 370 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 SLC9A6Q92581 669 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 STARD4Q96DR4 205 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 OTUB1Q96FW1 271 aaPredicted RBP20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 C16orf58Q96GQ5 468 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 PTGES2Q9H7Z7 377 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 C3orf14Q9HBI5 128 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 FBXO34Q9NWN3 711 aa20.03■□□□□ 0.8
NEDD4L-237ENST00000617539 H3BML4 177 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 SEC14L5O43304 696 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 KCNK2O95069 426 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 OXSR1O95747 527 aaPredicted RBP20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 ASMTP46597 345 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 CPA2P48052 419 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 C17orf67Q0P5P2 114 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 SZRD1Q7Z422 152 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 MEIOBQ8N635 442 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 OR7A2PQ8NGA2 310 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 CEP70Q8NHQ1 597 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 GOT1L1Q8NHS2 421 aaPredicted RBP20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 NUDT8Q8WV74 236 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 MTERF3Q96E29 417 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 ZNF845Q96IR2 970 aaPredicted RBP20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 NPAS1Q99742 590 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 KLHDC3Q9BQ90 382 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 ATP6V1HQ9UI12 483 aa20.02■□□□□ 0.8
NEDD4L-237ENST00000617539 ZFHX3Q15911 3703 aa20.02■□□□□ 0.79
NEDD4L-237ENST00000617539 A0A1W2PPR1 153 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 ALG1L2C9J202 215 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 SCAMP2O15127 329 aaKnown RBP20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 PEX11AO75192 247 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 TNFRSF21O75509 655 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 NGFRP08138 427 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 KIR2DL2P43627 348 aaPredicted RBP20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 CLK3P49761 638 aaKnown RBP20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 RIPPLY3P57055 190 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 PTGR1Q14914 329 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 GLYR1Q49A26 553 aaPredicted RBP20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 VPS26BQ4G0F5 336 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 FIGNL1Q6PIW4 674 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 PAMR1Q6UXH9 720 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 P4HA3Q7Z4N8 544 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 BTLAQ7Z6A9 289 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 GGNQ86UU5 652 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 FNDC9Q8TBE3 224 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 FAM120BQ96EK7 910 aaKnown RBP20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 PIGQQ9BRB3 760 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 YIPF4Q9BSR8 244 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 PINK1Q9BXM7 581 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 PLEKHF2Q9H8W4 249 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 RNF122Q9H9V4 155 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 EML4Q9HC35 981 aaKnown RBP20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 ZDHHC2Q9UIJ5 367 aa20.01■□□□□ 0.79
NEDD4L-237ENST00000617539 SH3D21A4FU49 640 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 LINC01387J3KSC0 135 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 MSTNO14793 375 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 EMC8O43402 210 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 HRGP04196 525 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 CRHP06850 196 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 LAMP1P11279 417 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 CPOXP36551 454 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 IFFO1Q0D2I5 559 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 MLC1Q15049 377 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 CCNJQ5T5M9 372 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 OR2A2Q6IF42 318 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 CNEP1R1Q8N9A8 125 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 GATSQ8NAP1 163 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 PPP3R2Q96LZ3 170 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 DACH2Q96NX9 599 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 C1orf50Q9BV19 199 aa20■□□□□ 0.79
NEDD4L-237ENST00000617539 NUP214P35658 2090 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms