RNA–Protein interactions for RNA: ENST00000617270.4

RFX3-212, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFX3, Length 9,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-212ENST00000617270 PPT1P50897 306 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 RAB35Q15286 201 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 DEFB110Q30KQ9 67 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 PNCKQ6P2M8 343 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 CREB3L2Q70SY1 520 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ZNF761Q86XN6 746 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 DCP2Q8IU60 420 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 C2CD4AQ8NCU7 369 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 HPSE2Q8WWQ2 592 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 PRRC1Q96M27 445 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 UHRF2Q96PU4 802 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 GINS3Q9BRX5 216 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 TTYH3Q9C0H2 523 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OR51J1Q9H342 316 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ACOT13Q9NPJ3 140 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OLAHQ9NV23 265 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 LOC105369274A0A096LPK9 316 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 KLF11O14901 512 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 HCRTO43612 131 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 KDELR3O43731 214 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ENSAO43768 121 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 EPOP01588 193 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 GABRA2P47869 451 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 SMAD2Q15796 467 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 AAK1Q2M2I8 961 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OR4N4Q8N0Y3 316 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OR2T27Q8NH04 317 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 IRF7Q92985 503 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 FOXRED1Q96CU9 486 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 ALG8Q9BVK2 526 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 MEGF6O75095 1541 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 NPIPA7E9PJI5 369 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 MAGEB4O15481 346 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 EEDO75530 441 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 NPIPA8P0DM63 369 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 HLA-DOBP13765 273 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 FCER1GP30273 86 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 STK19P49842 368 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 GABARAPL2P60520 117 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 SIM1P81133 766 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 CHRNEQ04844 493 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ARL6IP1Q15041 203 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ABHD12BQ7Z5M8 362 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 CD163Q86VB7 1156 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ADGRF3Q8IZF5 1079 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OR4K5Q8NGD3 323 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 SLC35B2Q8TB61 432 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 STT3BQ8TCJ2 826 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 FOXN4Q96NZ1 517 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ADAM19Q9H013 955 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 GNB4Q9HAV0 340 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 MRPL22Q9NWU5 206 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 USP36Q9P275 1121 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 C5AR2Q9P296 337 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OR10J4P0C629 311 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 CD6P30203 668 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 CLDN6P56747 220 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 SCAPQ12770 1279 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 DCAF12L1Q5VU92 463 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 FJX1Q86VR8 437 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 RBMXL3Q8N7X1 1067 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 NIPA2Q8N8Q9 360 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 CNEP1R1Q8N9A8 125 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OR52N2Q8NGI0 321 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 CHTF18Q8WVB6 975 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ZUFSPQ96AP4 578 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ZDHHC18Q9NUE0 388 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 APOBEC3BQ9UH17 382 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 SLC7A7Q9UM01 511 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 NPIPA5A0A0B4J1W7 369 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 SCAMP2O15127 329 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 UNGP13051 313 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 HOXD11P31277 338 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 ARG2P78540 354 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 BTN1A1Q13410 526 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 SLC9A3R2Q15599 337 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 PLEKHS1Q5SXH7 462 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 TMEM71Q6P5X7 295 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 STEAP2Q8NFT2 490 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 DMBX1Q8NFW5 382 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OR13J1Q8NGT2 312 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 CAPNS2Q96L46 248 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ELF4Q99607 663 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 QPCTLQ9NXS2 382 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 POLHQ9Y253 713 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 NUBP2Q9Y5Y2 271 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ZNF891A8MT65 544 aaPredicted RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 A8MVM7 634 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 H3BMQ9 156 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OPN1LWP04000 364 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 C1GALT1C1LP0DN25 315 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 PSMB10P40306 273 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 HADHBP55084 474 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 RPS15AP62244 130 aaKnown RBP5.69□□□□□ -1.5
RFX3-212ENST00000617270 KHDC1LQ5JSQ8 128 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 ZFAND4Q86XD8 727 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 PRR22Q8IZ63 422 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 FAM58AQ8N1B3 248 aa5.69□□□□□ -1.5
RFX3-212ENST00000617270 OR4Q3Q8NH05 313 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms