RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CT45A2Q5DJT8 189 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CT45A1Q5HYN5 189 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SPATA19Q7Z5L4 167 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 ZNF554Q86TJ5 538 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CCDC71LQ8N9Z2 235 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 OR4C13Q8NGP0 309 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CT45A3Q8NHU0 189 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 RBPMSQ93062 196 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 CTRCQ99895 268 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 PLEKHA2Q9HB19 425 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 FLRT1Q9NZU1 646 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 TP53TG5Q9Y2B4 290 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 CFAP20Q9Y6A4 193 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 COL4A3Q01955 1670 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 A6NIZ1 184 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 MPZL2O60487 215 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 STC2O76061 302 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 FTCDO95954 541 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 DBIP07108 87 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 NME1P15531 152 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 STOMP27105 288 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 POU3F4P49335 361 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 NR0B1P51843 470 aaKnown RBP3.15□□□□□ -1.91
LPP-220ENST00000617246 RAP1BP61224 184 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 RAP1AP62834 184 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 PNCKQ6P2M8 343 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SLC26A9Q7LBE3 791 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 SLC38A6Q8IZM9 456 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 OR11G2Q8NGC1 345 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 BBS10Q8TAM1 723 aa3.15□□□□□ -1.91
LPP-220ENST00000617246 H0YIG0 161 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 DNASE2O00115 360 aaPredicted RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 CNIH1O95406 144 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 OPN1MWP04001 364 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 OPN1MW2P0DN77 364 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 OPN1MW3P0DN78 364 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 T-ENOLP0DO92 83 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 DEFA4P12838 97 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 GUCA2AQ02747 115 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 MERTKQ12866 999 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 MOGSQ13724 837 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 OR1C1Q15619 314 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 C15orf59Q2T9L4 293 aaPredicted RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 CXorf57Q6NSI4 855 aaKnown RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 SLCO6A1Q86UG4 719 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CHFRQ96EP1 664 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 AJAP1Q9UKB5 411 aaPredicted RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 ING4Q9UNL4 249 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 ANKRD33BA6NCL7 494 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 NARSO43776 548 aaKnown RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 KLKB1P03952 638 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CASP5P51878 434 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 EML3Q32P44 896 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SFT2D3Q587I9 215 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 PLCZ1Q86YW0 608 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 FANK1Q8TC84 345 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 APIPQ96GX9 242 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 FAM237AA0A1B0GTK4 181 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CDC14BO60729 498 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 ADAP1O75689 374 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 MT-CO1P00395 513 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 GGT1P19440 569 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 GSK3AP49840 483 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SCAPQ12770 1279 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 C11orf91Q3C1V1 193 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CEP78Q5JTW2 689 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CCNJQ5T5M9 372 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 ADCK1Q86TW2 530 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 PROSER1Q86XN7 944 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 RCN3Q96D15 328 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 MS4A4EQ96PG1 132 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SLC35C2Q9NQQ7 365 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 SIRT5Q9NXA8 310 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 DCTN4Q9UJW0 460 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 IGHV1OR15-9A0A0B4J2B8 117 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 HELTA6NFD8 242 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CHRNGP07510 517 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 GM2AP17900 193 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 AQP6Q13520 282 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 NFE2L1Q14494 772 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 FAM205BPQ63HN1 556 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CYP2R1Q6VVX0 501 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 PARS2Q7L3T8 475 aaKnown RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 C2orf73Q8N5S3 287 aaPredicted RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 MORN4Q8NDC4 146 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 NUP43Q8NFH3 380 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 OR52E1Q8NGJ3 308 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 LRRC1Q9BTT6 524 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 MKS1Q9NXB0 559 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 GAR1Q9NY12 217 aaKnown RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 CKAP5Q14008 2032 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 ZNF195O14628 629 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 RCBTB2O95199 551 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 CBX6O95503 412 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 ANXA4P09525 319 aaPredicted RBP3.14□□□□□ -1.91
LPP-220ENST00000617246 TSPAN7P41732 249 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 LGALS7P47929 136 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 LSSP48449 732 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 TSPAN5P62079 268 aa3.14□□□□□ -1.91
LPP-220ENST00000617246 C12orf29Q8N999 325 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms