RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 FGF11Q92914 225 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 PTP4A1Q93096 173 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 WBP1Q96G27 269 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ERMAPQ96PL5 475 aaPredicted RBP20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 ABCG5Q9H222 651 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 CYSLTR2Q9NS75 346 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 SEMA3GQ9NS98 782 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 DOCK9Q9BZ29 2069 aa20.55■□□□□ 0.88
POLR2J3-220ENST00000613744 SULT1A3P0DMM9 295 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 SULT1A4P0DMN0 295 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 DNASE1P24855 282 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 ELAVL4P26378 380 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 RBMS1P29558 406 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 FNTBP49356 437 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 MAP2K6P52564 334 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 PTPN5P54829 565 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 CAV3P56539 151 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 CTBP2P56545 445 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 MADCAM1Q13477 382 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 CHRNA6Q15825 494 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 RASGRP3Q8IV61 690 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 CXorf40AQ8TE69 158 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 SCAMP4Q969E2 229 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 RAB7BQ96AH8 199 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 KCTD12Q96CX2 325 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 THAP7Q9BT49 309 aaPredicted RBP20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 EXTL2Q9UBQ6 330 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 NPTNQ9Y639 398 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 IGLON5A6NGN9 336 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 GTPBP1O00178 669 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 FFAR1O14842 300 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 ACSM4P0C7M7 580 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 AHCYP23526 432 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 NUP62P37198 522 aaPredicted RBP20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 NSG1P42857 185 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 PPP2CBP62714 309 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 PPP2CAP67775 309 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 EFNB1P98172 346 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 IRF8Q02556 426 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 IKBIPQ70UQ0 350 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 CBARPQ8N350 705 aaPredicted RBP20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 LINC00471Q8N535 108 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 OR5M3Q8NGP4 307 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 ADAMTS14Q8WXS8 1223 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 NLNQ9BYT8 704 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 ZFR2Q9UPR6 939 aaKnown RBP20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 SLC22A14Q9Y267 594 aa20.54■□□□□ 0.88
POLR2J3-220ENST00000613744 H0YIV9 168 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 OR10H3O60404 316 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 SOX14O95416 240 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 C6P13671 934 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 HOXB1P14653 301 aaPredicted RBP20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 BTCP35070 178 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 NTRK2Q16620 822 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 SHEQ5VZ18 495 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 PGBD2Q6P3X8 592 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 MAMSTRQ6ZN01 415 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 LINC00518Q8N0U6 118 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 NXPE1Q8N323 547 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 MS4A15Q8N5U1 240 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 DTX3Q8N9I9 347 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 LILRB1Q8NHL6 650 aaPredicted RBP20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 NEIL3Q8TAT5 605 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 ASB11Q8WXH4 323 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 FAM131CQ96AQ9 280 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 SGTBQ96EQ0 304 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 DPYSL5Q9BPU6 564 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 GPR174Q9BXC1 333 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 TMEM168Q9H0V1 697 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 SLC6A15Q9H2J7 730 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 REEP4Q9H6H4 257 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 TVP23BQ9NYZ1 205 aa20.53■□□□□ 0.88
POLR2J3-220ENST00000613744 VPS13AQ96RL7 3174 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 LRRK1Q38SD2 2015 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 IGHV1OR15-9A0A0B4J2B8 117 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 SMIM30A4D0T7 59 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 MFSD2BA6NFX1 497 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 PRODHO43272 600 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 CHST10O43529 356 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 TLX2O43763 284 aaPredicted RBP20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 RNGTTO60942 597 aaKnown RBP20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 H1F0P07305 194 aaKnown RBP20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 UGT2B7P16662 529 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 F8A1P23610 371 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 HBA1P69905 142 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 TMEM52BQ4KMG9 183 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 ZNF485Q8NCK3 441 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 OR52H1Q8NGJ2 320 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 OR2T4Q8NH00 348 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 REG4Q9BYZ8 158 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 RNF32Q9H0A6 362 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 RERGLQ9H628 205 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 C6orf106Q9H6K1 298 aaPredicted RBP20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 LDAHQ9H6V9 325 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 PRMT8Q9NR22 394 aaPredicted RBP20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 RHCGQ9UBD6 479 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 ZMAT5Q9UDW3 170 aaKnown RBP20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 EXO1Q9UQ84 846 aaKnown RBP20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 KCNMB2Q9Y691 235 aa20.52■□□□□ 0.88
POLR2J3-220ENST00000613744 TEX13CA0A0J9YWL9 993 aa20.52■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms