RNA–Protein interactions for RNA: ENST00000613670.4

LIG1-221, Transcript of DNA ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LIG1, Length 3,949 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-221ENST00000613670 TSPAN31Q12999 210 aa11.82□□□□□ -0.52
LIG1-221ENST00000613670 PGGHGQ32M88 737 aa11.82□□□□□ -0.52
LIG1-221ENST00000613670 GPR135Q8IZ08 494 aa11.82□□□□□ -0.52
LIG1-221ENST00000613670 PFDN2Q9UHV9 154 aa11.82□□□□□ -0.52
LIG1-221ENST00000613670 ASCC3Q8N3C0 2202 aaKnown RBP11.82□□□□□ -0.52
LIG1-221ENST00000613670 A0A1W2PRQ8 180 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 UNC119BA6NIH7 251 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 PIP5K1CO60331 668 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 RCBTB2O95199 551 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 RASGRP1O95267 797 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 HLA-DQA2P01906 255 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 ADH5P11766 374 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 ZNF3P17036 446 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 CTNNB1P35222 781 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 METAP1P53582 386 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 ACSM3Q53FZ2 586 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 HES5Q5TA89 166 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 PXDC1Q5TGL8 231 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 POMZP3Q6PJE2 187 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 QSOX2Q6ZRP7 698 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 TECPR1Q7Z6L1 1165 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 UPRTQ96BW1 309 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 MRPL48Q96GC5 212 aaKnown RBP11.81□□□□□ -0.52
LIG1-221ENST00000613670 PIGUQ9H490 435 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 WDR26Q9H7D7 661 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 FKBP14Q9NWM8 211 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 GLTPQ9NZD2 209 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 MGAT4CQ9UBM8 478 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 MED31Q9Y3C7 131 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 IGLON5A6NGN9 336 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 POM121CA8CG34 1229 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 FMO6PO60774 539 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 GATBO75879 557 aaKnown RBP11.81□□□□□ -0.52
LIG1-221ENST00000613670 CMPK1P30085 196 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 OR10A3P58181 314 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 LTB4RQ15722 352 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 DEFB134Q4QY38 66 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 YIF1BQ5BJH7 314 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 C18orf63Q68DL7 685 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 C12orf73Q69YU5 71 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 RPTNQ6XPR3 784 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 CREB3L2Q70SY1 520 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 DPPA4Q7L190 304 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 GID4Q8IVV7 300 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 TMEM255BQ8WV15 326 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 C4orf36Q96KX1 117 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 COQ10AQ96MF6 247 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 MS4A8Q9BY19 250 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 SEMA4GQ9NTN9 838 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 REV1Q9UBZ9 1251 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 BAIAP2Q9UQB8 552 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 TMEM5Q9Y2B1 443 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 BRCA1P38398 1863 aaKnown RBP11.81□□□□□ -0.52
LIG1-221ENST00000613670 TMEM129A0AVI4 362 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 ARL6IP5O75915 188 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 PDGFAP04085 211 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 RHOP08100 348 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 ADRA2AP08913 450 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 PSMA3P25788 255 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 PCBP3P57721 371 aaKnown RBP11.81□□□□□ -0.52
LIG1-221ENST00000613670 ZNF155Q12901 538 aaPredicted RBP11.81□□□□□ -0.52
LIG1-221ENST00000613670 FAM209AQ5JX71 171 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 PYHIN1Q6K0P9 492 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 LCTLQ6UWM7 567 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 PRSS45Q7RTY3 260 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 CAMKMTQ7Z624 323 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 OAFQ86UD1 273 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 PARGQ86W56 976 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 TMC8Q8IU68 726 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 ACOT4Q8N9L9 421 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 ACOT11Q8WXI4 607 aaPredicted RBP11.81□□□□□ -0.52
LIG1-221ENST00000613670 CREB3L1Q96BA8 519 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 ZMYND19Q96E35 227 aaPredicted RBP11.81□□□□□ -0.52
LIG1-221ENST00000613670 DNAJA3Q96EY1 480 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 LMLNQ96KR4 655 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 AMDHD1Q96NU7 426 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 SIGLEC11Q96RL6 698 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 WFDC6Q9BQY6 131 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 OR52D1Q9H346 318 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 IL21Q9HBE4 155 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 OR10H1Q9Y4A9 318 aa11.81□□□□□ -0.52
LIG1-221ENST00000613670 SLC9B1P1A6NJY1 282 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 CHRM4P08173 479 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 ACADLP28330 430 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 OMPP47874 163 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 PSMA6P60900 246 aaKnown RBP11.8□□□□□ -0.52
LIG1-221ENST00000613670 SLC7A9P82251 487 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 TPBGQ13641 420 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 Q6ZNB5 142 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 LRRC28Q86X40 367 aaPredicted RBP11.8□□□□□ -0.52
LIG1-221ENST00000613670 SLC39A11Q8N1S5 342 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 OR4K13Q8NH42 304 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 WDFY2Q96P53 400 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 OR7D2Q96RA2 312 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 ISG20L2Q9H9L3 353 aaKnown RBP11.8□□□□□ -0.52
LIG1-221ENST00000613670 SLC25A19Q9HC21 320 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 GPN1Q9HCN4 374 aaPredicted RBP11.8□□□□□ -0.52
LIG1-221ENST00000613670 ZSCAN32Q9NX65 697 aa11.8□□□□□ -0.52
LIG1-221ENST00000613670 AKAP7Q9P0M2 348 aaPredicted RBP11.8□□□□□ -0.52
LIG1-221ENST00000613670 A4GNTQ9UNA3 340 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms