RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 MYLK2Q9H1R3 596 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 CACYBPQ9HB71 228 aaKnown RBP12.13□□□□□ -0.47
MDC1-209ENST00000613547 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 GALNT9Q9HCQ5 603 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 FBXO34Q9NWN3 711 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 QPCTLQ9NXS2 382 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 CALML5Q9NZT1 146 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 VAPAQ9P0L0 249 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 PPP4R1LQ9P1A2 415 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 SEC14L3Q9UDX4 400 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 NPIPA1Q9UND3 350 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 WDR45Q9Y484 360 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 GMEB1Q9Y692 573 aa12.13□□□□□ -0.47
MDC1-209ENST00000613547 TRBV5-3A0A0A0MS03 114 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 A0A1W2PQD3 144 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 LRRC3CA6NJW4 275 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 ALG1L2C9J202 215 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 FBP2O00757 339 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 NDUFAB1O14561 156 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 NDUFB5O43674 189 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 CBR3O75828 277 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 UNC5CO95185 931 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 ANGPTL1O95841 491 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 ENDOUP21128 410 aaKnown RBP12.12□□□□□ -0.47
MDC1-209ENST00000613547 GDF1P27539 372 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 MVDP53602 400 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 ATP12AP54707 1039 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 RBPJQ06330 500 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 C17orf67Q0P5P2 114 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 GPR68Q15743 365 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 RNFT1Q5M7Z0 435 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 REP15Q6BDI9 236 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 MARCH3Q86UD3 253 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 PLCZ1Q86YW0 608 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 MSRB3Q8IXL7 192 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 GHDCQ8N2G8 530 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 TMEM251Q8N6I4 163 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 MIB2Q96AX9 1013 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 ANKRD27Q96NW4 1050 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 CCDC106Q9BWC9 280 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 TSPAN10Q9H1Z9 355 aaPredicted RBP12.12□□□□□ -0.47
MDC1-209ENST00000613547 ZNF703Q9H7S9 590 aaPredicted RBP12.12□□□□□ -0.47
MDC1-209ENST00000613547 PTGES2Q9H7Z7 377 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 C15orf41Q9Y2V0 281 aa12.12□□□□□ -0.47
MDC1-209ENST00000613547 C2orf72A6NCS6 295 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 C5orf58C9J3I9 102 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 KIAA0513O60268 411 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 CDC40O60508 579 aaKnown RBP eCLIP12.11□□□□□ -0.47
MDC1-209ENST00000613547 H6PDO95479 791 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 OXSR1O95747 527 aaPredicted RBP12.11□□□□□ -0.47
MDC1-209ENST00000613547 C1QCP02747 245 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 BCHEP06276 602 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 GPX2P18283 190 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 MST1P26927 711 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 PRDX6P30041 224 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 GCKP35557 465 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 PTGDSP41222 190 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 MAGEA5P43359 124 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 CRISP3P54108 245 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 FOXK1P85037 733 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 SLC10A1Q14973 349 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 TOMM20Q15388 145 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 ZNF630Q2M218 657 aaPredicted RBP12.11□□□□□ -0.47
MDC1-209ENST00000613547 RUNDC3AQ59EK9 446 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 CMPK2Q5EBM0 449 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 GFRALQ6UXV0 394 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 LRRC74BQ6ZQY2 392 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 MTERF4Q7Z6M4 381 aaKnown RBP12.11□□□□□ -0.47
MDC1-209ENST00000613547 ZAR1Q86SH2 424 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 SIAH3Q8IW03 269 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 ZNF619Q8N2I2 560 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 METTL25Q8N6Q8 603 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 POU5F2Q8N7G0 328 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 ZNF614Q8N883 585 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 ANKFN1Q8N957 763 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 ST6GALNAC3Q8NDV1 305 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 OR4K17Q8NGC6 315 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 DUSP19Q8WTR2 217 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 NTNG2Q96CW9 530 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 RCN3Q96D15 328 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 GPR137Q96N19 417 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 CPPED1Q9BRF8 314 aaPredicted RBP12.11□□□□□ -0.47
MDC1-209ENST00000613547 LDAHQ9H6V9 325 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 ZDHHC11Q9H8X9 412 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 EFCAB1Q9HAE3 211 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 A4GALTQ9NPC4 353 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 FLRT3Q9NZU0 649 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 MKLN1Q9UL63 735 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 DTNAQ9Y4J8 743 aa12.11□□□□□ -0.47
MDC1-209ENST00000613547 C15orf38-AP3S2A0A0A6YYH1 394 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 ANKUB1A6NFN9 424 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 GTPBP1O00178 669 aaKnown RBP12.1□□□□□ -0.47
MDC1-209ENST00000613547 AIM2O14862 343 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 FCMRO60667 390 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 TRAPPC6AO75865 159 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 RFPL3SP0C7P2 107 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 BMP2P12643 396 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 MSX1P28360 303 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 TDGF1P3P51864 188 aa12.1□□□□□ -0.47
MDC1-209ENST00000613547 GAS1P54826 345 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms