RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 FAM60AQ9NP50 221 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 NCKAP1Q9Y2A7 1128 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 HYKKA2RU49 373 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 B3GALT2O43825 422 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 SNX4O95219 450 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 TSPAN19P0C672 248 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 HNRNPA2B1P22626 353 aaKnown RBP13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 ZNF136P52737 540 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 CDH11P55287 796 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 KIAA1024LP59773 190 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 MLLT11Q13015 90 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 SELENBP1Q13228 472 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 GNA13Q14344 377 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 ZNF181Q2M3W8 571 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 HEPHL1Q6MZM0 1159 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 SLC36A4Q6YBV0 504 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 NCCRP1Q6ZVX7 275 aaPredicted RBP13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 ABI3BPQ7Z7G0 1075 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 SLC30A2Q9BRI3 323 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 TMED9Q9BVK6 235 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 HCAR1Q9BXC0 346 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 ANKHQ9HCJ1 492 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 HRASLS2Q9NWW9 162 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 PILRAQ9UKJ1 303 aa13.12□□□□□ -0.31
PCDHGA3-202ENST00000612467 ZNF670-ZNF695F2Z2N8 137 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 H3BQ06 376 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 HRKO00198 91 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 PRODHO43272 600 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 ZGLP1P0C6A0 271 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SMIM10L1P0DMW3 83 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 MYL12AP19105 171 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 FABP5Q01469 135 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 ZNF45Q02386 682 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 PLAURQ03405 335 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 HTR4Q13639 388 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 C1DQ13901 141 aaKnown RBP13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SUZ12Q15022 739 aaKnown RBP13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 ZNF79Q15937 498 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 CRTC2Q53ET0 693 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 Q6ZS52 159 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 OR2L13Q8N349 312 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 DEFB119Q8N690 84 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 RSC1A1Q92681 617 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 RNF31Q96EP0 1072 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SMIM10Q96HG1 83 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 HDHD5Q9BXW7 423 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 TBC1D17Q9HA65 648 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 ABCB9Q9NP78 766 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SEC14L4Q9UDX3 406 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 MALT1Q9UDY8 824 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 TBC1D24Q9ULP9 559 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SSR3Q9UNL2 185 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 V9GYH0 126 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 WDR87Q6ZQQ6 2873 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SHISA3A0PJX4 238 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 GABRG2P18507 467 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 MAKP20794 623 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 WNT4P56705 351 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 FXYD6P3P58550 94 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 ERV3-1Q14264 604 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 NNATQ16517 81 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 MRPL2Q5T653 305 aaKnown RBP13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 FAM160A2Q8N612 972 aaPredicted RBP13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 OR4N2Q8NGD1 307 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 NT5CQ8TCD5 201 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 GRHL3Q8TE85 626 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SLC37A2Q8TED4 501 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 MOAP1Q96BY2 351 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SMAD5Q99717 465 aaKnown RBP13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 HINT3Q9NQE9 182 aaKnown RBP13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SLC22A7Q9Y694 548 aa13.11□□□□□ -0.31
PCDHGA3-202ENST00000612467 SYT5O00445 386 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 GNB5O14775 395 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 SURF4O15260 269 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 HRO43593 1189 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 ADAM11O75078 769 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 RDH16O75452 317 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 ALOX5P09917 674 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 PRKAR1BP31321 381 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 NDUFA9Q16795 377 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 ZNF628Q5EBL2 1059 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 RASSF6Q6ZTQ3 369 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 CPOQ8IVL8 374 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 SIRT6Q8N6T7 355 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 Q8N9G6 341 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 ACOT11Q8WXI4 607 aaPredicted RBP13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 SERINC2Q96SA4 455 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 PRSS27Q9BQR3 290 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 TTTY10Q9BZA0 68 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 MIXL1Q9H2W2 232 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 ISG20L2Q9H9L3 353 aaKnown RBP13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 KLHL28Q9NXS3 571 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 CPNE7Q9UBL6 633 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 POU2F3Q9UKI9 436 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 C2orf92A0A1B0GVN3 265 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 SNPHO15079 494 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 KCNJ13O60928 360 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 GSTM3P21266 225 aa13.1□□□□□ -0.31
PCDHGA3-202ENST00000612467 GCGRP47871 477 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms