RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 SNRPB2P08579 225 aaKnown RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 CPN1P15169 458 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 POU3F2P20265 443 aaPredicted RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 MSX1P28360 303 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 TIMP3P35625 211 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 ZNF41P51814 821 aaPredicted RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 DGKQP52824 942 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 WDR4P57081 412 aaKnown RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 RPS3AP61247 264 aaKnown RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 EEF1A1P68104 462 aaKnown RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 SRYQ05066 204 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 DUSP5Q16690 384 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 ACSF3Q4G176 576 aaPredicted RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 ATAD3BQ5T9A4 648 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 EEF1A1P5Q5VTE0 462 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 NSUN5P2Q63ZY6 315 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 OGFOD2Q6N063 350 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 FIGNL1Q6PIW4 674 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 P4HA3Q7Z4N8 544 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 CCDC71Q8IV32 467 aaPredicted RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 RIMKLAQ8IXN7 391 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 MARVELD2Q8N4S9 558 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 OR8J2Q8NGG1 315 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 PIWIL2Q8TC59 973 aaKnown RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 ZPLD1Q8TCW7 415 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 DUSP19Q8WTR2 217 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 TESCQ96BS2 214 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 SLC35G5Q96KT7 338 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 ZFP3Q96NJ6 502 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 TM9SF2Q99805 663 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 C20orf27Q9GZN8 174 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 MARCOQ9UEW3 520 aaPredicted RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 FBXL2Q9UKC9 423 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 RPH3AQ9Y2J0 694 aaPredicted RBP11.21□□□□□ -0.61
CBWD3-208ENST00000612050 FAM215AQ9Y5M1 114 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 HRH3Q9Y5N1 445 aa11.21□□□□□ -0.61
CBWD3-208ENST00000612050 FREM3P0C091 2139 aa11.21□□□□□ -0.62
CBWD3-208ENST00000612050 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 A0A087WZY1 265 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 RNF103-CHMP3A0A140T963 221 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 PRSS51A0A1B0GVH4 220 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 CD8B2A6NJW9 211 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 HMGB1P1B2RPK0 211 aaPredicted RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 E9PBE3 544 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 KLF11O14901 512 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 KCNK2O95069 426 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 CPSF4O95639 269 aaKnown RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 ACP2P11117 423 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 IDO1P14902 403 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 TBXA2RP21731 343 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 TCEA1P23193 301 aaKnown RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 GRNP28799 593 aaKnown RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 SSTR2P30874 369 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 CHI3L1P36222 383 aaPredicted RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 HPCAP84074 193 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 GRAMD1BQ3KR37 738 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 GLYR1Q49A26 553 aaPredicted RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 OR4F3Q6IEY1 312 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 MEX3BQ6ZN04 569 aaKnown RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 C16orf62Q7Z3J2 963 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 MTERF4Q7Z6M4 381 aaKnown RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 MARCH3Q86UD3 253 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 MCEMP1Q8IX19 187 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 RPRMLQ8N4K4 120 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 GLB1L3Q8NCI6 653 aaPredicted RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 OR2M3Q8NG83 312 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 PSMA8Q8TAA3 256 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 HOXB13Q92826 284 aaPredicted RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 CDS1Q92903 461 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 ARL8AQ96BM9 186 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 NTNG2Q96CW9 530 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 GIMAP5Q96F15 307 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 WDYHV1Q96HA8 205 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 ATP6V1G3Q96LB4 118 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 SPOCK3Q9BQ16 436 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 CXorf36Q9H7Y0 433 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 SIRT3Q9NTG7 399 aaPredicted RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 MED11Q9P086 117 aa11.2□□□□□ -0.62
CBWD3-208ENST00000612050 ZNF629Q9UEG4 869 aaPredicted RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 SPTAN1Q13813 2472 aaKnown RBP11.2□□□□□ -0.62
CBWD3-208ENST00000612050 A0A0G2JNJ9 132 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 A0A1W2PQD3 144 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 ALG1L2C9J202 215 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 GTPBP1O00178 669 aaKnown RBP11.19□□□□□ -0.62
CBWD3-208ENST00000612050 SNNO75324 88 aaPredicted RBP11.19□□□□□ -0.62
CBWD3-208ENST00000612050 OXSR1O95747 527 aaPredicted RBP11.19□□□□□ -0.62
CBWD3-208ENST00000612050 NUDT14O95848 222 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 MATN1P21941 496 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 UQCRC2P22695 453 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 ME2P23368 584 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 OPRM1P35372 400 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 GAS1P54826 345 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 STX1BP61266 288 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 HBA1P69905 142 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 BCL2A1Q16548 175 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 FLYWCH1Q4VC44 716 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 DCST2Q5T1A1 773 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 CES4AQ5XG92 561 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 RTL6Q6ICC9 239 aa11.19□□□□□ -0.62
CBWD3-208ENST00000612050 OR2A2Q6IF42 318 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms