RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 KLHDC3Q9BQ90 382 aa13.15□□□□□ -0.3
HDDC2-204ENST00000608295 BHLHE41Q9C0J9 482 aaPredicted RBP13.15□□□□□ -0.3
HDDC2-204ENST00000608295 MANSC1Q9H8J5 431 aa13.15□□□□□ -0.3
HDDC2-204ENST00000608295 CHST11Q9NPF2 352 aa13.15□□□□□ -0.3
HDDC2-204ENST00000608295 NPDC1Q9NQX5 325 aaPredicted RBP13.15□□□□□ -0.3
HDDC2-204ENST00000608295 THAP1Q9NVV9 213 aa13.15□□□□□ -0.3
HDDC2-204ENST00000608295 ASIC5Q9NY37 505 aa13.15□□□□□ -0.3
HDDC2-204ENST00000608295 HAO1Q9UJM8 370 aa13.15□□□□□ -0.3
HDDC2-204ENST00000608295 FAF1Q9UNN5 650 aaPredicted RBP13.15□□□□□ -0.3
HDDC2-204ENST00000608295 VDAC3Q9Y277 283 aa13.15□□□□□ -0.3
HDDC2-204ENST00000608295 H3BML4 177 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 HPGDP15428 266 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 BMP5P22003 454 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 CLK3P49761 638 aaKnown RBP13.14□□□□□ -0.31
HDDC2-204ENST00000608295 DGKQP52824 942 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 UFM1P61960 85 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 PSPHP78330 225 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 OCRLQ01968 901 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 NDUFAF6Q330K2 333 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 LSM12Q3MHD2 195 aaKnown RBP13.14□□□□□ -0.31
HDDC2-204ENST00000608295 FAM174BQ3ZCQ3 159 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 SLC9B1Q4ZJI4 515 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 AGBL2Q5U5Z8 902 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 PPP4R4Q6NUP7 873 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 CDC73Q6P1J9 531 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 DNAJC14Q6Y2X3 702 aaPredicted RBP13.14□□□□□ -0.31
HDDC2-204ENST00000608295 WDR75Q8IWA0 830 aaKnown RBP13.14□□□□□ -0.31
HDDC2-204ENST00000608295 HOMEZQ8IX15 550 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 PM20D2Q8IYS1 436 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 GCNT2Q8N0V5 402 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 OR56A1Q8NGH5 318 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 ADAMTS15Q8TE58 950 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 RNF138Q8WVD3 245 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 SLC35G5Q96KT7 338 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 TEX37Q96LM6 180 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 TUBA1CQ9BQE3 449 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 PRDM14Q9GZV8 571 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 SERHL2Q9H4I8 314 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 NEUROD4Q9HD90 331 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 GPATCH2Q9NW75 528 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 ABCG2Q9UNQ0 655 aa13.14□□□□□ -0.31
HDDC2-204ENST00000608295 H0YC42 278 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 HDAC3O15379 428 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 C1QCP02747 245 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 IFI6P09912 130 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 ATP6V1C1P21283 382 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 MAP3K8P41279 467 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 ZFP36L2P47974 494 aaKnown RBP13.13□□□□□ -0.31
HDDC2-204ENST00000608295 TPD52P55327 224 aaPredicted RBP13.13□□□□□ -0.31
HDDC2-204ENST00000608295 RCAN2Q14206 197 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 MLC1Q15049 377 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 CD226Q15762 336 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 DCST2Q5T1A1 773 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 ARSKQ6UWY0 536 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 MAVSQ7Z434 540 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 HMGN2P46Q86SG4 172 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 LSRQ86X29 649 aaPredicted RBP13.13□□□□□ -0.31
HDDC2-204ENST00000608295 GOLGA6L1Q8N7Z2 621 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 FADS6Q8N9I5 356 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 C9orf106Q8NAJ2 232 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 HOXB13Q92826 284 aaPredicted RBP13.13□□□□□ -0.31
HDDC2-204ENST00000608295 ATP6V1G3Q96LB4 118 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 OR7D2Q96RA2 312 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 NPAS1Q99742 590 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 ACTRT3Q9BYD9 372 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 KCNJ16Q9NPI9 418 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 AIG1Q9NVV5 245 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 NTMQ9P121 344 aa13.13□□□□□ -0.31
HDDC2-204ENST00000608295 CELSR2Q9HCU4 2923 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 NOTCH2Q04721 2471 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 CLCA1A8K7I4 914 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 EEF1E1-BLOC1S5C9J1V9 151 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 E9PBE3 544 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 SCDO00767 359 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 EEF1E1O43324 174 aaKnown RBP13.12□□□□□ -0.31
HDDC2-204ENST00000608295 NDUFB5O43674 189 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 ZIC3O60481 467 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 DIAPH2O60879 1101 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 SNUPNO95149 360 aaKnown RBP13.12□□□□□ -0.31
HDDC2-204ENST00000608295 ACTL6AO96019 429 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 OPN1LWP04000 364 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 POU3F2P20265 443 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-204ENST00000608295 IL12AP29459 219 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 LHX2P50458 406 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 GFRA1P56159 465 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 DSCR4P56555 118 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-204ENST00000608295 PHC1P78364 1004 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 TNFAIP8L2Q6P589 184 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-204ENST00000608295 ENPP6Q6UWR7 440 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 LACC1Q8IV20 430 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 RELL2Q8NC24 303 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-204ENST00000608295 LILRB4Q8NHJ6 448 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 SFXN5Q8TD22 340 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 ZNF75CPQ92670 426 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-204ENST00000608295 OR52B2Q96RD2 323 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 BTBD2Q9BX70 525 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 PIGUQ9H490 435 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 TMEM185BQ9H7F4 350 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 PTGES2Q9H7Z7 377 aa13.12□□□□□ -0.31
HDDC2-204ENST00000608295 SLCO1B3Q9NPD5 702 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms