RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 PHF21BQ96EK2 531 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF419Q96HQ0 510 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 ZNF479Q96JC4 524 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 FAM193BQ96PV7 902 aaPredicted RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 RNF2Q99496 336 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 HSD17B14Q9BPX1 270 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 TMEM47Q9BQJ4 181 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 SPXQ9BT56 116 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 TAPBPLQ9BX59 468 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 POFUT1Q9H488 388 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 SNTG1Q9NSN8 517 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 RYDENQ9NUL5 291 aaKnown RBP8.34□□□□□ -1.07
COMMD3-215ENST00000602574 OBP2AQ9NY56 170 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 PSORS1C1Q9UIG5 152 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 USP21Q9UK80 565 aa8.34□□□□□ -1.07
COMMD3-215ENST00000602574 LOC102723532A0A0G2JNH3 316 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 SUSD5O60279 629 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 GALR3O60755 368 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 PRAF2O60831 178 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 AKAP3O75969 853 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 CLDN9O95484 217 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 IFNA21P01568 189 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 ERCC1P07992 297 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 GIMD1P0DJR0 217 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 VEGFAP15692 232 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 MPSTP25325 297 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 ARR3P36575 388 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 GLP1RP43220 463 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 GCLMP48507 274 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 SOX10P56693 466 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 SHC2P98077 582 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 PLA2G7Q13093 441 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 GBX1Q14549 363 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 AGKQ53H12 422 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 MESTQ5EB52 335 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 BCL2L15Q5TBC7 163 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 KIAA0319Q5VV43 1072 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 LAIR1Q6GTX8 287 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 DPPA4Q7L190 304 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 KLHDC8BQ8IXV7 354 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 ACBD7Q8N6N7 88 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 C12orf76Q8N812 135 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 OR10A6Q8NH74 314 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 NT5C3BQ969T7 300 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 SLC25A46Q96AG3 418 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 VWCEQ96DN2 955 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 MRGPRX1Q96LB2 322 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 PRO1933Q9H354 126 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 TASP1Q9H6P5 420 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 IL17RBQ9NRM6 502 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 KLHL28Q9NXS3 571 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 TMEFF2Q9UIK5 374 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 ROBO1Q9Y6N7 1651 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 DOT1LQ8TEK3 1739 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 BAZ2BQ9UIF8 2168 aaKnown RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 CLCA1A8K7I4 914 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 G3V2L1 256 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 FXYD1O00168 92 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 SIAH2O43255 324 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 AP2A2O94973 939 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 GLP2RO95838 553 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 MT-ND5P03915 603 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 IL2RBP14784 551 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 KLRK1P26718 216 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 GKP32189 559 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 OTX1P32242 354 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 RPL22P35268 128 aaKnown RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 INPP1P49441 399 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 MAXP61244 160 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 DLK1P80370 383 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 CDH18Q13634 790 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 RFTN2Q52LD8 501 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 FAM102BQ5T8I3 360 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 PRAMEF20Q5VT98 475 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 OTUD1Q5VV17 481 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 ZNF529Q6P280 563 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 IL27RAQ6UWB1 636 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 BTNL3Q6UXE8 466 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 TMUB2Q71RG4 321 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 PXKQ7Z7A4 578 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 CACUL1Q86Y37 369 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 PNLDC1Q8NA58 520 aaKnown RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 OR9Q2Q8NGE9 314 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 OR52E4Q8NGH9 312 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 OR13C8Q8NGS7 320 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 SP7Q8TDD2 431 aaPredicted RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 NPRL2Q8WTW4 380 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 PHYHIPQ92561 330 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 CMBLQ96DG6 245 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 LRCH3Q96II8 777 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 C12orf66Q96MD2 445 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 S100A13Q99584 98 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 URM1Q9BTM9 101 aaKnown RBP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 DPAGT1Q9H3H5 408 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 RNF167Q9H6Y7 350 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 ISYNA1Q9NPH2 558 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.33□□□□□ -1.08
COMMD3-215ENST00000602574 DMAC2Q9NW81 257 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 C2orf42Q9NWW7 574 aa8.33□□□□□ -1.08
COMMD3-215ENST00000602574 SMPXQ9UHP9 88 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms