RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ZNF551Q7Z340 670 aaPredicted RBP16.16■□□□□ 0.18
CHMP2A-208ENST00000601220 ZNF550Q7Z398 422 aa16.16■□□□□ 0.18
CHMP2A-208ENST00000601220 PPP1R14CQ8TAE6 165 aa16.16■□□□□ 0.18
CHMP2A-208ENST00000601220 IGFBPL1Q8WX77 278 aa16.16■□□□□ 0.18
CHMP2A-208ENST00000601220 PIK3R3Q92569 461 aa16.16■□□□□ 0.18
CHMP2A-208ENST00000601220 COX4I2Q96KJ9 171 aa16.16■□□□□ 0.18
CHMP2A-208ENST00000601220 NPAS1Q99742 590 aa16.16■□□□□ 0.18
CHMP2A-208ENST00000601220 MED18Q9BUE0 208 aa16.16■□□□□ 0.18
CHMP2A-208ENST00000601220 PSMC3IPQ9P2W1 217 aaPredicted RBP16.16■□□□□ 0.18
CHMP2A-208ENST00000601220 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 TTC36A6NLP5 189 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 ARHGEF9O43307 516 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 SMPD2O60906 423 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 NKX2-2O95096 273 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 HEXAP06865 529 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 THBDP07204 575 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 MYL2P10916 166 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 CLK3P49761 638 aaKnown RBP16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 DNAJB13P59910 316 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 FGFBP1Q14512 234 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 ZNHIT3Q15649 155 aaPredicted RBP16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 PRSS57Q6UWY2 283 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 FAM214BQ7L5A3 538 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 OR4C3Q8NH37 302 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 FAM110BQ8TC76 370 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 CCDC126Q96EE4 140 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 GIMAP5Q96F15 307 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 METTL2AQ96IZ6 378 aaKnown RBP16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 ADGRG7Q96K78 797 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 FCRL1Q96LA6 429 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 PLSCR4Q9NRQ2 329 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 NTMQ9P121 344 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 TBK1Q9UHD2 729 aa16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 MRTO4Q9UKD2 239 aaKnown RBP16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 FN1P02751 2386 aaKnown RBP16.15■□□□□ 0.18
CHMP2A-208ENST00000601220 ALG1L2C9J202 215 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 H3BQF6 201 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 PLIN3O60664 434 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 LY6G6DO95868 133 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 IL11P20809 199 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 TBXA2RP21731 343 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 PSMA4P25789 261 aaKnown RBP16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 RFX3P48380 749 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 PSMD4P55036 377 aaKnown RBP16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 NAA20P61599 178 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 IMPG1Q17R60 797 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 CTU2Q2VPK5 515 aaKnown RBP16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 EXOSC6Q5RKV6 272 aaKnown RBP16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 ANKRD34AQ69YU3 496 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 Q6ZSR9 355 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 EXOC3L1Q86VI1 746 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 P3H2Q8IVL5 708 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 CIDECQ96AQ7 238 aaPredicted RBP16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 ZNF764Q96H86 408 aaPredicted RBP16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 KLHDC3Q9BQ90 382 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 TBL1XR1Q9BZK7 514 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 ZNF395Q9H8N7 513 aaPredicted RBP16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 RRAGDQ9NQL2 400 aaPredicted RBP16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 OXSMQ9NWU1 459 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 PROCRQ9UNN8 238 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 PTGDR2Q9Y5Y4 395 aa16.14■□□□□ 0.17
CHMP2A-208ENST00000601220 PCNX3Q9H6A9 2034 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 KLF4O43474 513 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 TBX19O60806 448 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 NGFRP08138 427 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 UROSP10746 265 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 PRPS2P11908 318 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 FPR1P21462 350 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 FRKP42685 505 aaPredicted RBP16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 RPS3AP61247 264 aaKnown RBP16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 ZNF385BQ569K4 471 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 ANKRD26P1Q6NSI1 321 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 ZAR1Q86SH2 424 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 IFT20Q8IY31 132 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 CAVIN3Q969G5 261 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 GFM2Q969S9 779 aaKnown RBP16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 ZC3HAV1LQ96H79 300 aaKnown RBP16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 C12orf65Q9H3J6 166 aaKnown RBP16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 UBTD1Q9HAC8 227 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 C3orf14Q9HBI5 128 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 EQTNQ9NQ60 294 aa16.13■□□□□ 0.17
CHMP2A-208ENST00000601220 ADAMDEC1O15204 470 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 GMFGO60234 142 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 SS18L1O75177 396 aaPredicted RBP16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 GLRA3O75311 464 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 SEC22BO75396 215 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 KCNH1O95259 989 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 ACP2P11117 423 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 FCGR2AP12318 317 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 ZNF17P17021 662 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 KCNJ5P48544 419 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 HSPB3Q12988 150 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 PDE7AQ13946 482 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 CLEC6AQ6EIG7 209 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 C20orf204Q6ZNR8 217 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 CNPY4Q8N129 248 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 GTPBP8Q8N3Z3 284 aaPredicted RBP16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 OR2T11Q8NH01 316 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 OR10D3Q8NH80 312 aa16.12■□□□□ 0.17
CHMP2A-208ENST00000601220 POC1BQ8TC44 478 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms