RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 NAPGQ99747 312 aaPredicted RBP14.96□□□□□ -0.01
USE1-208ENST00000600970 GLRX2Q9NS18 164 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 PAQR5Q9NXK6 330 aaPredicted RBP14.96□□□□□ -0.01
USE1-208ENST00000600970 RNF14Q9UBS8 474 aa14.96□□□□□ -0.01
USE1-208ENST00000600970 MCTS1Q9ULC4 181 aaKnown RBP14.96□□□□□ -0.01
USE1-208ENST00000600970 A0A1W2PP18 115 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 CXCL13O43927 109 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 ANGPTL1O95841 491 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 OPN1LWP04000 364 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 CD3EP07766 207 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 FAM157CP0CG43 387 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 HSD3B1P14060 373 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 HSD3B2P26439 372 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 GNG11P61952 73 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 FAPQ12884 760 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 HEPACAMQ14CZ8 416 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 TSC22D1Q15714 1073 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 PGGHGQ32M88 737 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 APOOLQ6UXV4 268 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 GALNT10Q86SR1 603 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 WDR75Q8IWA0 830 aaKnown RBP14.95□□□□□ -0.02
USE1-208ENST00000600970 C16orf78Q8WTQ4 265 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 BBS4Q96RK4 519 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 NPAS1Q99742 590 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 TBL1XR1Q9BZK7 514 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 ESRP2Q9H6T0 727 aaKnown RBP14.95□□□□□ -0.02
USE1-208ENST00000600970 Q9N2J8 555 aa14.95□□□□□ -0.02
USE1-208ENST00000600970 GDF2Q9UK05 429 aaPredicted RBP14.95□□□□□ -0.02
USE1-208ENST00000600970 A0A087WV62 115 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 GNG14A0A1W2PPG7 69 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 MANBAO00462 879 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 TNFSF11O14788 317 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 GPRIN2O60269 458 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 GCM2O75603 506 aaPredicted RBP14.94□□□□□ -0.02
USE1-208ENST00000600970 UTS2O95399 124 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 SYNGR4O95473 234 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 TUBBP07437 444 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 ZNF17P17021 662 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 RFX3P48380 749 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 PRR5P85299 388 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 CAV1Q03135 178 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 CSTF3Q12996 717 aaKnown RBP14.94□□□□□ -0.02
USE1-208ENST00000600970 TRADDQ15628 312 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 PRSS53Q2L4Q9 553 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 FIGNL1Q6PIW4 674 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 ZDHHC24Q6UX98 284 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 ATG4DQ86TL0 474 aaPredicted RBP14.94□□□□□ -0.02
USE1-208ENST00000600970 C11orf24Q96F05 449 aaPredicted RBP14.94□□□□□ -0.02
USE1-208ENST00000600970 APIPQ96GX9 242 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 HDHD5Q9BXW7 423 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 FBXO34Q9NWN3 711 aa14.94□□□□□ -0.02
USE1-208ENST00000600970 DMGDHQ9UI17 866 aaKnown RBP14.94□□□□□ -0.02
USE1-208ENST00000600970 MRTO4Q9UKD2 239 aaKnown RBP14.94□□□□□ -0.02
USE1-208ENST00000600970 C19orf53Q9UNZ5 99 aaPredicted RBP14.94□□□□□ -0.02
USE1-208ENST00000600970 MYO1GB0I1T2 1018 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 UPK1AO00322 258 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 ADAMDEC1O15204 470 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 PSMG1O95456 288 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 CD8AP01732 235 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 JUNP05412 331 aaKnown RBP14.93□□□□□ -0.02
USE1-208ENST00000600970 HSD17B3P37058 310 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 MAGEA12P43365 314 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 PSMD4P55036 377 aaKnown RBP14.93□□□□□ -0.02
USE1-208ENST00000600970 TAB1Q15750 504 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 GRAMD1BQ3KR37 738 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 KRTAP24-1Q3LI83 254 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 SFRP5Q5T4F7 317 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 C6orf52Q5T4I8 152 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 TMEM107Q6UX40 140 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 DNAJC14Q6Y2X3 702 aaPredicted RBP14.93□□□□□ -0.02
USE1-208ENST00000600970 GABRG1Q8N1C3 465 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 ZNF619Q8N2I2 560 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 CDYL2Q8N8U2 506 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 KBTBD8Q8NFY9 601 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 OR2V1Q8NHB1 315 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 SLC9A6Q92581 669 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 HS6ST2Q96MM7 605 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 TRAF4Q9BUZ4 470 aaPredicted RBP14.93□□□□□ -0.02
USE1-208ENST00000600970 C1QTNF3Q9BXJ4 246 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 ACPTQ9BZG2 426 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 LRTM1Q9HBL6 345 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 NGBQ9NPG2 151 aa14.93□□□□□ -0.02
USE1-208ENST00000600970 UTP11Q9Y3A2 253 aaKnown RBP14.93□□□□□ -0.02
USE1-208ENST00000600970 A0A087WZY1 265 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 A0A0J9YW62 118 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 A8MT66 165 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 NTN1O95631 604 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 IGKV1D-16P01601 117 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 KRT6AP02538 564 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 KRT6BP04259 564 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 PSMA4P25789 261 aaKnown RBP14.92□□□□□ -0.02
USE1-208ENST00000600970 ADH6P28332 368 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 TIA1P31483 386 aaKnown RBP eCLIP14.92□□□□□ -0.02
USE1-208ENST00000600970 KRT6CP48668 564 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 NCBP2P52298 156 aaKnown RBP eCLIP14.92□□□□□ -0.02
USE1-208ENST00000600970 RAC1P63000 192 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 CLCQ05315 142 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 ACSM2AQ08AH3 577 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 C2orf54Q08AI8 447 aa14.92□□□□□ -0.02
USE1-208ENST00000600970 ZNHIT3Q15649 155 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms