RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 SENP5Q96HI0 755 aaPredicted RBP18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 C10orf90Q96M02 699 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 FRMD6Q96NE9 622 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 PPP1R3EQ9H7J1 279 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 B3GAT2Q9NPZ5 323 aa18.88■□□□□ 0.61
SHKBP1-225ENST00000600733 A0A1W2PQU0 124 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 EML2O95834 649 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 FUT1P19526 365 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 GCGRP47871 477 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 FZD5Q13467 585 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 LCN1P1Q5VSP4 162 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 HEPHL1Q6MZM0 1159 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 MTSS1LQ765P7 747 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 ZFPM2Q8WW38 1151 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 PLSCR3Q9NRY6 295 aa18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 EXOGQ9Y2C4 368 aaKnown RBP18.87■□□□□ 0.61
SHKBP1-225ENST00000600733 IGHA1P01876 353 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 HLA-DPB1P04440 258 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 HTR1FP30939 366 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 TSFMP43897 325 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 RNF144AP50876 292 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 CCNJQ5T5M9 372 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 ZNF836Q6ZNA1 936 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 OR2T33Q8NG76 320 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 OR51G2Q8NGK0 314 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 OR14C36Q8NHC7 312 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 C1QTNF2Q9BXJ5 285 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 TEX12Q9BXU0 123 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 SLC6A17Q9H1V8 727 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 ISG20L2Q9H9L3 353 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 FGF22Q9HCT0 170 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 WDR45Q9Y484 360 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 ZC3H12DA2A288 527 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 ADH1BP00325 375 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 NDUFV2P19404 249 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 TEAD1P28347 426 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 ARFIP1P53367 373 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 RPS21P63220 83 aaKnown RBP18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 CD83Q01151 205 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 IL18Q14116 193 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 EOGTQ5NDL2 527 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 TRIQKQ629K1 86 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 LRRC25Q8N386 305 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 NACC2Q96BF6 587 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 MS4A4EQ96PG1 132 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 SOSTQ9BQB4 213 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 SLC17A9Q9BYT1 436 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 PAQR5Q9NXK6 330 aaPredicted RBP18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 TNFRSF10DQ9UBN6 386 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 CDH10Q9Y6N8 788 aa18.86■□□□□ 0.61
SHKBP1-225ENST00000600733 C5orf67F2Z3F1 127 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 DNAJB6O75190 326 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 OR5F1O95221 314 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 TRAPPC2P0DI81 140 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 TRAPPC2BP0DI82 140 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 CDK10Q15131 360 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 QPRTQ15274 297 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 ZNF322Q6U7Q0 402 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 ART5Q96L15 291 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 YIPF2Q9BWQ6 316 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 PLA2G2FQ9BZM2 168 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 RNF32Q9H0A6 362 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 UBQLN3Q9H347 655 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 MED20Q9H944 212 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 LYARQ9NX58 379 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 TBC1D29Q9UFV1 150 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 PRKAG2Q9UGJ0 569 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 SZT2Q5T011 3432 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 CHST10O43529 356 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 RNGTTO60942 597 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 ZGLP1P0C6A0 271 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 PRG2P13727 222 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 SEC13P55735 322 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 SIM1P81133 766 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 DUSP5Q16690 384 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 CDC73Q6P1J9 531 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 PLBD1Q6P4A8 553 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 TMEM91Q6ZNR0 172 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 CXXC5Q7LFL8 322 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 AMIGO1Q86WK6 493 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 ASCC1Q8N9N2 400 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 C19orf18Q8NEA5 215 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 ZCCHC10Q8TBK6 192 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 DNAJA4Q8WW22 397 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 LCN9Q8WX39 176 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 RNF170Q96K19 258 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 MKRN2Q9H000 416 aaKnown RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 TRIM45Q9H8W5 580 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 MTHFD2LQ9H903 347 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 MED17Q9NVC6 651 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 NLGN3Q9NZ94 848 aa18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 H2AFY2Q9P0M6 372 aaPredicted RBP18.85■□□□□ 0.61
SHKBP1-225ENST00000600733 DUXAA6NLW8 204 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 SLC31A1O15431 190 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 PSKH1P11801 424 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 MAP2K3P46734 347 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 EVX1P49640 407 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 GPR68Q15743 365 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 TMEM44Q2T9K0 475 aa18.84■□□□□ 0.61
SHKBP1-225ENST00000600733 SMARCD3Q6STE5 483 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms