RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 PSD2Q9BQI7 771 aa14.05□□□□□ -0.16
HIF3A-218ENST00000600383 UCK2Q9BZX2 261 aa14.05□□□□□ -0.16
HIF3A-218ENST00000600383 PRODH2Q9UF12 536 aa14.05□□□□□ -0.16
HIF3A-218ENST00000600383 MGAT4BQ9UQ53 548 aa14.05□□□□□ -0.16
HIF3A-218ENST00000600383 TCRBV16S1A1N1A0A5B0 115 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 ARRDC5A6NEK1 342 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 CCDC160A6NGH7 325 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 EFCAB7A8K855 629 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 D6RAR5 112 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 H3BN98 237 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 BCAS1O75363 584 aaPredicted RBP14.04□□□□□ -0.16
HIF3A-218ENST00000600383 LDOC1O95751 146 aaPredicted RBP14.04□□□□□ -0.16
HIF3A-218ENST00000600383 ADAP00813 363 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 CLPSP04118 112 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 IGFBP1P08833 259 aaPredicted RBP14.04□□□□□ -0.16
HIF3A-218ENST00000600383 PTNP21246 168 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 RPS4Y1P22090 263 aaKnown RBP14.04□□□□□ -0.16
HIF3A-218ENST00000600383 RPS6KA3P51812 740 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 UGT2B15P54855 530 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 SLC37A1P57057 533 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 TUBA4AP68366 448 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 SMN1Q16637 294 aaKnown RBP14.04□□□□□ -0.16
HIF3A-218ENST00000600383 NKAIN1Q4KMZ8 207 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 LANCL3Q6ZV70 420 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 AMER2Q8N7J2 671 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 BCORP1Q8N888 145 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 TMIGD2Q96BF3 282 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 LMF1Q96S06 567 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 PHOX2BQ99453 314 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 FUZQ9BT04 418 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 POLR2J3Q9H1A7 115 aaKnown RBP14.04□□□□□ -0.16
HIF3A-218ENST00000600383 ARMC7Q9H6L4 198 aa14.04□□□□□ -0.16
HIF3A-218ENST00000600383 A0A087WUU8 490 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 LNP1A1A4G5 178 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 CDHR4A6H8M9 788 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 FAM86C2PA6NEL3 165 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 CHMP24386 653 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 RORAP35398 523 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 GRK6P43250 576 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 HLCSP50747 726 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 TRAM2Q15035 370 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 ELAVL1Q15717 326 aaKnown RBP14.03□□□□□ -0.16
HIF3A-218ENST00000600383 ZNF730Q6ZMV8 503 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 COX15Q7KZN9 410 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 ZER1Q7Z7L7 766 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 RANBP3LQ86VV4 465 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-218ENST00000600383 NKAIN4Q8IVV8 208 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 SLITRK4Q8IW52 837 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 ENTHD1Q8IYW4 607 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 OR7G1Q8NGA0 311 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 DIO2Q92813 273 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 EFHD2Q96C19 240 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-218ENST00000600383 GAL3ST4Q96RP7 486 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 G6PC3Q9BUM1 346 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 POLE3Q9NRF9 147 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 HSPE1-MOB4S4R3N1 261 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 ADAMTS20P59510 1910 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 IGHV3-20A0A0C4DH32 117 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 CDC14CA4D256 554 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 TRIM64A6NGJ6 449 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 SLC1A7O00341 560 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 ZGLP1P0C6A0 271 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 MMP11P24347 488 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 GGT2P36268 569 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 ZNF136P52737 540 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 CRISP1P54107 249 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 DCDP81605 110 aaKnown RBP14.03□□□□□ -0.16
HIF3A-218ENST00000600383 MAD2L1BPQ15013 274 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-218ENST00000600383 MED25Q71SY5 747 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 GDF7Q7Z4P5 450 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 PARP8Q8N3A8 854 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 MORN4Q8NDC4 146 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 CNOT9Q92600 299 aaKnown RBP14.03□□□□□ -0.16
HIF3A-218ENST00000600383 DAZLQ92904 295 aaKnown RBP14.03□□□□□ -0.16
HIF3A-218ENST00000600383 SLC41A3Q96GZ6 507 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 PITX2Q99697 317 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 CCDC90BQ9GZT6 254 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 FAM192AQ9GZU8 254 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 TUBA8Q9NY65 449 aaPredicted RBP14.03□□□□□ -0.16
HIF3A-218ENST00000600383 ENOPH1Q9UHY7 261 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 BLOC1S6Q9UL45 172 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 SLC7A7Q9UM01 511 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 RNF6Q9Y252 685 aa14.03□□□□□ -0.16
HIF3A-218ENST00000600383 M0R129 80 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 POLR1CO15160 346 aaPredicted RBP14.02□□□□□ -0.16
HIF3A-218ENST00000600383 DDAH2O95865 285 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 THY1P04216 161 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 OSMP13725 252 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 RBM44Q6ZP01 1051 aaKnown RBP14.02□□□□□ -0.16
HIF3A-218ENST00000600383 KCTD8Q6ZWB6 473 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 PRICKLE2Q7Z3G6 844 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 APLFQ8IW19 511 aaPredicted RBP14.02□□□□□ -0.16
HIF3A-218ENST00000600383 OR4C3Q8NH37 302 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 ZNF721Q8TF20 911 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 PMM1Q92871 262 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 NUDT9Q9BW91 350 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 NRSN2Q9GZP1 204 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 NXF5Q9H1B4 397 aaKnown RBP14.02□□□□□ -0.16
HIF3A-218ENST00000600383 IMPAD1Q9NX62 359 aa14.02□□□□□ -0.16
HIF3A-218ENST00000600383 SIDT1Q9NXL6 827 aaKnown RBP14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms