RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 MRTO4Q9UKD2 239 aaKnown RBP17.28■□□□□ 0.36
CCDC9-205ENST00000600117 CORO2BQ9UQ03 480 aa17.28■□□□□ 0.36
CCDC9-205ENST00000600117 DIDO1Q9BTC0 2240 aaKnown RBP17.28■□□□□ 0.36
CCDC9-205ENST00000600117 CCT8L1PA6NM43 557 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 ADAM10O14672 748 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 TP53I11O14683 189 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 NME2P1O60361 137 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 SP1P08047 785 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 NME2P22392 152 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 LCN1P31025 176 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 RFX3P48380 749 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 GZMMP51124 257 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 PSMD4P55036 377 aaKnown RBP17.27■□□□□ 0.36
CCDC9-205ENST00000600117 MRPL49Q13405 166 aaKnown RBP17.27■□□□□ 0.36
CCDC9-205ENST00000600117 ZNF169Q14929 603 aaPredicted RBP17.27■□□□□ 0.36
CCDC9-205ENST00000600117 INPP5JQ15735 1006 aaPredicted RBP17.27■□□□□ 0.36
CCDC9-205ENST00000600117 ZNF766Q5HY98 468 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 ATAD3BQ5T9A4 648 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 AP1ARQ63HQ0 302 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 TMEM81Q6P7N7 255 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 C16orf62Q7Z3J2 963 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 FBXW8Q8N3Y1 598 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 ANKFN1Q8N957 763 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 TMEM125Q96AQ2 219 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 G6PC3Q9BUM1 346 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 THUMPD3Q9BV44 507 aaKnown RBP17.27■□□□□ 0.36
CCDC9-205ENST00000600117 KAT8Q9H7Z6 458 aaKnown RBP17.27■□□□□ 0.36
CCDC9-205ENST00000600117 PROK2Q9HC23 129 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 TIMMDC1Q9NPL8 285 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 LIPT1Q9Y234 373 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 B3GNT3Q9Y2A9 372 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 PCDHGB6Q9Y5F9 930 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 EML6Q6ZMW3 1958 aa17.27■□□□□ 0.36
CCDC9-205ENST00000600117 POLEQ07864 2286 aa17.27■□□□□ 0.35
CCDC9-205ENST00000600117 A0A0G2JMM0 328 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 A0A1W2PPB8 328 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 A0A1W2PRS3 328 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 KIR3DP1A8MWS1 328 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 NPIPB9F8W1W9 429 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 ICOSLGO75144 302 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 UBOX5O94941 541 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 UTS2O95399 124 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 LDLRP01130 860 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 CHRM4P08173 479 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 GUSBP08236 651 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 TFPTP0C1Z6 253 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 ESRRAP11474 423 aaPredicted RBP17.26■□□□□ 0.35
CCDC9-205ENST00000600117 CD46P15529 392 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 PTGDSP41222 190 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 ART3Q13508 389 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 ADRM1Q16186 407 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 SYPL1Q16563 259 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 PLEKHN1Q494U1 663 aaPredicted RBP17.26■□□□□ 0.35
CCDC9-205ENST00000600117 SLC22A10Q63ZE4 541 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 BICRALQ6AI39 1079 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 NET1Q7Z628 596 aaPredicted RBP17.26■□□□□ 0.35
CCDC9-205ENST00000600117 PRR7Q8TB68 274 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 C5orf34Q96MH7 638 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 TRNT1Q96Q11 434 aaKnown RBP17.26■□□□□ 0.35
CCDC9-205ENST00000600117 SH3GL1Q99961 368 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 HOPXQ9BPY8 73 aaPredicted RBP17.26■□□□□ 0.35
CCDC9-205ENST00000600117 SAP130Q9H0E3 1048 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 A4GALTQ9NPC4 353 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 KLHL1Q9NR64 748 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 SACM1LQ9NTJ5 587 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 DEPPQ9NTK1 212 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 CMTM6Q9NX76 183 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 THUMPD1Q9NXG2 353 aaKnown RBP17.26■□□□□ 0.35
CCDC9-205ENST00000600117 CNIH4Q9P003 139 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 HIVEP1P15822 2718 aa17.26■□□□□ 0.35
CCDC9-205ENST00000600117 C15orf38-AP3S2A0A0A6YYH1 394 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 ANKRD33BA6NCL7 494 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 FADS1O60427 444 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 FCMRO60667 390 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 ARAFP10398 606 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 CASP3P42574 277 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 GRAMD1BQ3KR37 738 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 GCNT6Q5T4J0 391 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 PRAMEF20Q5VT98 475 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 C1QL3Q5VWW1 255 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 C6orf89Q6UWU4 347 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 FRRS1Q6ZNA5 592 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 GALNTL5Q7Z4T8 443 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 ARPINQ7Z6K5 226 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 CALHM3Q86XJ0 350 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 PTOV1Q86YD1 416 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 SLC15A3Q8IY34 581 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 Q8NA96 180 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 OR4C3Q8NH37 302 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 GRHL3Q8TE85 626 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 SLC38A5Q8WUX1 472 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 MAL2Q969L2 176 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 PNPLA2Q96AD5 504 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 TMCO6Q96DC7 493 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 SLC38A1Q9H2H9 487 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 TMEM38AQ9H6F2 299 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 RUBCNLQ9H714 662 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 POLE3Q9NRF9 147 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 P2RX2Q9UBL9 471 aa17.25■□□□□ 0.35
CCDC9-205ENST00000600117 ERRFI1Q9UJM3 462 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms