RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 WISP2O76076 250 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 PSMG1O95456 288 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 IFI6P09912 130 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 ARAFP10398 606 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 BMP2P12643 396 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 S1PR1P21453 382 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 GALNSP34059 522 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 PCGF2P35227 344 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 CD96P40200 585 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 PRIM2P49643 509 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 ZNF155Q12901 538 aaPredicted RBP11.67□□□□□ -0.54
UPF1-208ENST00000600012 BIKQ13323 160 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 SCARB2Q14108 478 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 SFT2D3Q587I9 215 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 MFSD12Q6NUT3 480 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 GALNT10Q86SR1 603 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 SPATA24Q86W54 205 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 SPPL2CQ8IUH8 684 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 SLC44A2Q8IWA5 706 aaPredicted RBP11.67□□□□□ -0.54
UPF1-208ENST00000600012 LGI4Q8N135 537 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 TNIP2Q8NFZ5 429 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 FAM162AQ96A26 154 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 LRGUKQ96M69 825 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 FRMD6Q96NE9 622 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 OR7D2Q96RA2 312 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 ACTRT3Q9BYD9 372 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 HES7Q9BYE0 225 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 TRIM15Q9C019 465 aa11.67□□□□□ -0.54
UPF1-208ENST00000600012 MED13LQ71F56 2210 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 NPIPA5E9PKD4 350 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 CDK2AP1O14519 115 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 COQ9O75208 318 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 KRT36O76013 467 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 CLDN14O95500 239 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 CLPSP04118 112 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 BCHEP06276 602 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 ACP2P11117 423 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 AQP1P29972 269 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 SSTR2P30874 369 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 MRPS22P82650 360 aaKnown RBP11.66□□□□□ -0.54
UPF1-208ENST00000600012 CDK6Q00534 326 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 OC90Q02509 493 aaPredicted RBP11.66□□□□□ -0.54
UPF1-208ENST00000600012 ELAVL1Q15717 326 aaKnown RBP11.66□□□□□ -0.54
UPF1-208ENST00000600012 LRRC23Q53EV4 343 aaPredicted RBP11.66□□□□□ -0.54
UPF1-208ENST00000600012 RPS26P11Q5JNZ5 115 aaPredicted RBP11.66□□□□□ -0.54
UPF1-208ENST00000600012 CDC73Q6P1J9 531 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 OLIG3Q7RTU3 272 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 GALNTL5Q7Z4T8 443 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 ZNF321PQ8N8H1 164 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 C11orf65Q8NCR3 313 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 MIPOL1Q8TD10 442 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 SLC26A7Q8TE54 656 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 PTPMT1Q8WUK0 201 aaPredicted RBP11.66□□□□□ -0.54
UPF1-208ENST00000600012 XAGE5Q8WWM1 108 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 SLC9A6Q92581 669 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 RSRC1Q96IZ7 334 aaKnown RBP11.66□□□□□ -0.54
UPF1-208ENST00000600012 NSMCE2Q96MF7 247 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 TSPAN10Q9H1Z9 355 aaPredicted RBP11.66□□□□□ -0.54
UPF1-208ENST00000600012 TMEM38AQ9H6F2 299 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 A4GALTQ9NPC4 353 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 ANKRD10Q9NXR5 420 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 NPIPA1Q9UND3 350 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 MEMO1Q9Y316 297 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 KCNE3Q9Y6H6 103 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 V9GYQ6 96 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 EXPH5Q8NEV8 1989 aa11.66□□□□□ -0.54
UPF1-208ENST00000600012 TCRBV5S2A0A599 114 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 PRAMEF27A3QJZ7 478 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 H0Y3Z8 333 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 ASNA1O43681 348 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 MGRN1O60291 552 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 MAN1A2O60476 641 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 GMNNO75496 209 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 SP1P08047 785 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 ABOP16442 354 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 MAN2A2P49641 1150 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 ANXA11P50995 505 aaKnown RBP11.65□□□□□ -0.54
UPF1-208ENST00000600012 SLC26A5P58743 744 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 RBBP4Q09028 425 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 FUT5Q11128 374 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 FUT7Q11130 342 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 MAPK11Q15759 364 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 SYPL1Q16563 259 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 DUSP5Q16690 384 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 FBXW10Q5XX13 1052 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 SPINK14Q6IE38 97 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 SIAH3Q8IW03 269 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 ZNF295-AS1Q8N0V1 137 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 EID3Q8N140 333 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 GHDCQ8N2G8 530 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 ANKFN1Q8N957 763 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 SLC16A11Q8NCK7 471 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 SLC2A12Q8TD20 617 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 ADAMTS15Q8TE58 950 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 PHF10Q8WUB8 498 aaKnown RBP11.65□□□□□ -0.54
UPF1-208ENST00000600012 PYDC1Q8WXC3 89 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 CDS1Q92903 461 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 STMN2Q93045 179 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 TMEM19Q96HH6 336 aa11.65□□□□□ -0.54
UPF1-208ENST00000600012 OR8D2Q9GZM6 311 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms