RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 HSD11B2P80365 405 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 TRAM2Q15035 370 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 CD300LDQ6UXZ3 194 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 TTLL10Q6ZVT0 673 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 PTCHD4Q6ZW05 846 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 PLEKHM3Q6ZWE6 761 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 PRICKLE2Q7Z3G6 844 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 GATAD2AQ86YP4 633 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 OR4N2Q8NGD1 307 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 ADAMTS18Q8TE60 1221 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 SLC38A4Q969I6 547 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 FUNDC2Q9BWH2 189 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 ACOT13Q9NPJ3 140 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 NECTIN3Q9NQS3 549 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 FSCN3Q9NQT6 498 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 CUTCQ9NTM9 273 aa15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 WARS2Q9UGM6 360 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-216ENST00000598201 GPR179Q6PRD1 2367 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 A0A1W2PPW3 197 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 TRIM64BA6NI03 449 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 A8MU76 341 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 PATE3B3GLJ2 98 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 H0YIG0 161 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 DBIP07108 87 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 RFX3P48380 749 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 TMBIM6P55061 237 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 ROR2Q01974 943 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 NHLH1Q02575 133 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 TEKQ02763 1124 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 PLAURQ03405 335 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 ST3GAL3Q11203 375 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 ZNF267Q14586 743 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 TRIM61Q5EBN2 209 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 MRPL2Q5T653 305 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 C12orf73Q69YU5 71 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 GDF7Q7Z4P5 450 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 PLXDC1Q8IUK5 500 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 LINC00471Q8N535 108 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 IQCF1Q8N6M8 205 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 OR1L3Q8NH93 324 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 RORBQ92753 470 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 DGAT2Q96PD7 388 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 IL4I1Q96RQ9 567 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 LMF2Q9BU23 707 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 CACYBPQ9HB71 228 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 NDOR1Q9UHB4 597 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 RP1P56715 2156 aa15.81■□□□□ 0.12
SHKBP1-216ENST00000598201 BLACEA4D250 179 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 PROB1E7EW31 1015 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 MRPS14O60783 128 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 IGKV1D-16P01601 117 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 GKN3PP0CG01 181 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 NID1P14543 1247 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 FOLR1P15328 257 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 GPR3P46089 330 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 STT3AP46977 705 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 OR1D4P47884 311 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 ARRB1P49407 418 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 ALDH6A1Q02252 535 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 COX10Q12887 443 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 NR1D2Q14995 579 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 PLA2G2CQ5R387 149 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 SLC23A3Q6PIS1 610 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 SLC16A12Q6ZSM3 486 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 KIF18BQ86Y91 864 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 NR4A3Q92570 626 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 ARSGQ96EG1 525 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 SLC41A3Q96GZ6 507 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 VSTM2LQ96N03 204 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 DHCR7Q9UBM7 475 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 MN1Q10571 1320 aaPredicted RBP15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 AK1P00568 194 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 LCKP06239 509 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 ALAS2P22557 587 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 NR4A1P22736 598 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 HTR2AP28223 471 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 PI4KAP42356 2102 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 ARL4DP49703 201 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 PGDP52209 483 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 HSD17B7P56937 341 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 EIPR1Q53HC9 387 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 NPSR1Q6W5P4 371 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 ZNF730Q6ZMV8 503 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 D2HGDHQ8N465 521 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 SVOPQ8N4V2 548 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 NUDT22Q9BRQ3 303 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 CNPPD1Q9BV87 410 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 SMOC1Q9H4F8 434 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 LANCL2Q9NS86 450 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 CNIH4Q9P003 139 aa15.8■□□□□ 0.12
SHKBP1-216ENST00000598201 CDHR4A6H8M9 788 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 ZNF749O43361 778 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 OR5F1O95221 314 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 CDK1P06493 297 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 STSP08842 583 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 ADRA2AP08913 450 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 PTNP21246 168 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 OMPP47874 163 aa15.79■□□□□ 0.12
SHKBP1-216ENST00000598201 EMP3P54852 163 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms