RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 HYAL4Q2M3T9 481 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 EIPR1Q53HC9 387 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 SAXO2Q658L1 398 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 CGB2Q6NT52 195 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 ZNF585AQ6P3V2 769 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 ARHGAP11AQ6P4F7 1023 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 TMEM81Q6P7N7 255 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 TRILQ7L0X0 811 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 C16orf62Q7Z3J2 963 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 FGD2Q7Z6J4 655 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 CD163Q86VB7 1156 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 RNF130Q86XS8 419 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 PLCZ1Q86YW0 608 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 ZNF614Q8N883 585 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 WDSUB1Q8N9V3 476 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 OR4C3Q8NH37 302 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 OR14L1PQ8NHC6 308 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 GOT1L1Q8NHS2 421 aaPredicted RBP10.11□□□□□ -0.79
LIG1-211ENST00000596457 FAM57AQ8TBR7 257 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 FAM110BQ8TC76 370 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 DUSP19Q8WTR2 217 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 ITCHQ96J02 903 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 SIKE1Q9BRV8 207 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 RTN4RQ9BZR6 473 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 EXD2Q9NVH0 621 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 ERRFI1Q9UJM3 462 aaPredicted RBP10.11□□□□□ -0.79
LIG1-211ENST00000596457 DKKL1Q9UK85 242 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 FBXL2Q9UKC9 423 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 ACAD8Q9UKU7 415 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 TRIM33Q9UPN9 1127 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 HRH3Q9Y5N1 445 aa10.11□□□□□ -0.79
LIG1-211ENST00000596457 RP1L1Q8IWN7 2480 aaPredicted RBP10.1□□□□□ -0.79
LIG1-211ENST00000596457 A0A1B0GUH1 482 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 WIPF3A6NGB9 483 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 DUXAA6NLW8 204 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 SCDO00767 359 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 NDUFB5O43674 189 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 IGHG3P01860 377 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 STSP08842 583 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 CD1EP15812 388 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 CA7P43166 264 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 KHKP50053 298 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 GAS1P54826 345 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 PER3P56645 1201 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.1□□□□□ -0.79
LIG1-211ENST00000596457 GTDC1Q4AE62 458 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 GXYLT1Q4G148 440 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 FLYWCH1Q4VC44 716 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 GPAT3Q53EU6 434 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 EXOSC6Q5RKV6 272 aaKnown RBP10.1□□□□□ -0.79
LIG1-211ENST00000596457 ATAD3BQ5T9A4 648 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 HIST2H2BCQ6DN03 193 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 APOOLQ6UXV4 268 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 NCCRP1Q6ZVX7 275 aaPredicted RBP10.1□□□□□ -0.79
LIG1-211ENST00000596457 FUNDC1Q8IVP5 155 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 CHERPQ8IWX8 916 aaKnown RBP10.1□□□□□ -0.79
LIG1-211ENST00000596457 FAM83FQ8NEG4 500 aaPredicted RBP10.1□□□□□ -0.79
LIG1-211ENST00000596457 NEIL3Q8TAT5 605 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 SPDL1Q96EA4 605 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 NEURL3Q96EH8 262 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 SH3YL1Q96HL8 342 aaPredicted RBP10.1□□□□□ -0.79
LIG1-211ENST00000596457 SLC6A13Q9NSD5 602 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 QPCTLQ9NXS2 382 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 SPRR3Q9UBC9 169 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 ABCG2Q9UNQ0 655 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 RPH3AQ9Y2J0 694 aaPredicted RBP10.1□□□□□ -0.79
LIG1-211ENST00000596457 ZNF835Q9Y2P0 537 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 GTF3C1Q12789 2109 aa10.1□□□□□ -0.79
LIG1-211ENST00000596457 LRBAP50851 2863 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 PCNX3Q9H6A9 2034 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 SUSD5O60279 629 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 HCN1O60741 890 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 SOX30O94993 753 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 KRT75O95678 551 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 HPNP05981 417 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 HK1P19367 917 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 POU3F2P20265 443 aaPredicted RBP10.09□□□□□ -0.79
LIG1-211ENST00000596457 TBXA2RP21731 343 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 DPP4P27487 766 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 DCTP40126 519 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 CRATP43155 626 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 ATP4BP51164 291 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 C17orf67Q0P5P2 114 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.09□□□□□ -0.79
LIG1-211ENST00000596457 ARHGAP11BQ3KRB8 267 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 COX20Q5RI15 118 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.09□□□□□ -0.79
LIG1-211ENST00000596457 WLSQ5T9L3 541 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 BLOC1S3Q6QNY0 202 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 Q6ZPB1 254 aaPredicted RBP10.09□□□□□ -0.79
LIG1-211ENST00000596457 MSANTD1Q6ZTZ1 278 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 HMGN2P46Q86SG4 172 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 DOLPP1Q86YN1 238 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 PHOSPHO1Q8TCT1 267 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 ZFP90Q8TF47 636 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 GTF2H4Q92759 462 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 SARAFQ96BY9 339 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 NTNG2Q96CW9 530 aa10.09□□□□□ -0.79
LIG1-211ENST00000596457 AURKBQ96GD4 344 aaPredicted RBP10.09□□□□□ -0.79
LIG1-211ENST00000596457 SDF2Q99470 211 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms