RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 NPIPA5A0A0B4J1W7 369 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 WIPF3A6NGB9 483 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 NPIPA2E9PIF3 369 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 NPIPA7E9PJI5 369 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 NPIPA3F8WFD2 350 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 RFXANKO14593 260 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 TRAPPC6AO75865 159 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 TPOP07202 933 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 VIMP08670 466 aaKnown RBP13.64□□□□□ -0.23
SCN1B-204ENST00000596348 NPIPA8P0DM63 369 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 CAPN3P20807 821 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 TBXA2RP21731 343 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 CHI3L1P36222 383 aaPredicted RBP13.64□□□□□ -0.23
SCN1B-204ENST00000596348 LRRC74AQ0VAA2 488 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 FUT5Q11128 374 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 SQLEQ14534 574 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 GTDC1Q4AE62 458 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 WIPI1Q5MNZ9 446 aaPredicted RBP13.64□□□□□ -0.23
SCN1B-204ENST00000596348 SLC2A7Q6PXP3 512 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 ZNF621Q6ZSS3 439 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 OLIG3Q7RTU3 272 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 YRDCQ86U90 279 aaKnown RBP13.64□□□□□ -0.23
SCN1B-204ENST00000596348 FADS6Q8N9I5 356 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 CHDHQ8NE62 594 aaPredicted RBP13.64□□□□□ -0.23
SCN1B-204ENST00000596348 FAM83FQ8NEG4 500 aaPredicted RBP13.64□□□□□ -0.23
SCN1B-204ENST00000596348 NEIL3Q8TAT5 605 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 GTF2H4Q92759 462 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 RAB8BQ92930 207 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 ZNF317Q96PQ6 595 aaPredicted RBP13.64□□□□□ -0.23
SCN1B-204ENST00000596348 PHF12Q96QT6 1004 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 SDF2Q99470 211 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 G6PC3Q9BUM1 346 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 LDAHQ9H6V9 325 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 CCDC167Q9P0B6 97 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 CACNA1CQ13936 2221 aa13.64□□□□□ -0.23
SCN1B-204ENST00000596348 PHF3Q92576 2039 aaKnown RBP13.63□□□□□ -0.23
SCN1B-204ENST00000596348 A0A1B0GUH1 482 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 PRAMEF27A3QJZ7 478 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 OR14I1A6ND48 311 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 ALG1L2C9J202 215 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 NPIPB9F8W1W9 429 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 NR5A2O00482 541 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 CCL21O00585 134 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 DYNC1I1O14576 645 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 PRRG2O14669 202 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 CBR3O75828 277 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 ANGPTL1O95841 491 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 OR12D1P0DN82 309 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 TROVE2P10155 538 aaKnown RBP eCLIP13.63□□□□□ -0.23
SCN1B-204ENST00000596348 HOXB9P17482 250 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-204ENST00000596348 NCF2P19878 526 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-204ENST00000596348 LCN1P31025 176 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 TOMM20Q15388 145 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 AGKQ53H12 422 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 COX20Q5RI15 118 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 HEPHL1Q6MZM0 1159 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 NCCRP1Q6ZVX7 275 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-204ENST00000596348 RNF130Q86XS8 419 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 GATSQ8NAP1 163 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 OR2M3Q8NG83 312 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 OR5M9Q8NGP3 310 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 PNPT1Q8TCS8 783 aaKnown RBP13.63□□□□□ -0.23
SCN1B-204ENST00000596348 ZFP90Q8TF47 636 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 DUSP19Q8WTR2 217 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 SSC4DQ8WTU2 575 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 AURKBQ96GD4 344 aaPredicted RBP13.63□□□□□ -0.23
SCN1B-204ENST00000596348 ITCHQ96J02 903 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 TBL1XR1Q9BZK7 514 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 OR2B2Q9GZK3 357 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 DSN1Q9H410 356 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 EXO5Q9H790 373 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 UBQLN4Q9NRR5 601 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 PNPLA3Q9NST1 481 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 MED11Q9P086 117 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 PPP4R1LQ9P1A2 415 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 SLC6A5Q9Y345 797 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 HEATR5AQ86XA9 2040 aa13.63□□□□□ -0.23
SCN1B-204ENST00000596348 IGLV3-32A0A0A0MS00 114 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 DUXAA6NLW8 204 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 HMGN4O00479 90 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 ZG16O60844 167 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 SOX30O94993 753 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 ZCCHC18P0CG32 403 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 ATP6V1C1P21283 382 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 DCTP40126 519 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 KHKP50053 298 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 RNF144AP50876 292 aaPredicted RBP13.62□□□□□ -0.23
SCN1B-204ENST00000596348 MVDP53602 400 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 CASP6P55212 293 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 CRYZQ08257 329 aaKnown RBP13.62□□□□□ -0.23
SCN1B-204ENST00000596348 CD226Q15762 336 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 GXYLT1Q4G148 440 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 C6orf10Q5SRN2 563 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 DCST1Q5T197 706 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.62□□□□□ -0.23
SCN1B-204ENST00000596348 TRIML2Q8N7C3 387 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 OR4K17Q8NGC6 315 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 XAGE5Q8WWM1 108 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 SPDL1Q96EA4 605 aa13.62□□□□□ -0.23
SCN1B-204ENST00000596348 CCDC120Q96HB5 630 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms