RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 DSCR4P56555 118 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 NHSL2Q5HYW2 709 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 SAXO2Q658L1 398 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 OR5M10Q6IEU7 315 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 ZNF585AQ6P3V2 769 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 MISPQ8IVT2 679 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 PM20D2Q8IYS1 436 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 FAM83FQ8NEG4 500 aaPredicted RBP15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 CCDC120Q96HB5 630 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 PSMG3-AS1Q96PY0 264 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 PHF12Q96QT6 1004 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 OR2B2Q9GZK3 357 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 NPHS2Q9NP85 383 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 TAS2R10Q9NYW0 307 aa15.74■□□□□ 0.11
SHKBP1-212ENST00000596163 A0A1W2PQD3 144 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 H3BNH8 94 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 ZG16O60844 167 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 OXSR1O95747 527 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 ACTL6AO96019 429 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 TROVE2P10155 538 aaKnown RBP eCLIP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 ENDOUP21128 410 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 DPP4P27487 766 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 MSX1P28360 303 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 MAGEA8P43361 318 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 KHKP50053 298 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 STX5Q13190 355 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 GANABQ14697 944 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 EIPR1Q53HC9 387 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 WIPI1Q5MNZ9 446 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 CCNJQ5T5M9 372 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 VASNQ6EMK4 673 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 AAGABQ6PD74 315 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 XKRXQ6PP77 449 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 C16orf62Q7Z3J2 963 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 GALNT10Q86SR1 603 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 YRDCQ86U90 279 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 CLEC4FQ8N1N0 589 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 ZNF808Q8N4W9 903 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 FADS6Q8N9I5 356 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 CHDHQ8NE62 594 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 OR5M9Q8NGP3 310 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 OR4C3Q8NH37 302 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 ABTB1Q969K4 478 aaPredicted RBP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 OR51I1Q9H343 314 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 DSN1Q9H410 356 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 PNPLA3Q9NST1 481 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 ALKBH4Q9NXW9 302 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 FLRT3Q9NZU0 649 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 SPRR3Q9UBC9 169 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 DCTN4Q9UJW0 460 aa15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 ASH1LQ9NR48 2969 aaKnown RBP15.73■□□□□ 0.11
SHKBP1-212ENST00000596163 AHRRA9YTQ3 701 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 STX11O75558 287 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 VIMP08670 466 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 ZCCHC18P0CG32 403 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 NCF2P19878 526 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 AGAP20933 346 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 ACVR2AP27037 513 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 ATP12AP54707 1039 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 RPS26P62854 115 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 SQLEQ14534 574 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 ARHGAP11BQ3KRB8 267 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 GLYR1Q49A26 553 aaPredicted RBP15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 FLYWCH1Q4VC44 716 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 EMC4Q5J8M3 183 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 ENPP6Q6UWR7 440 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 MTERF4Q7Z6M4 381 aaKnown RBP15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 MRGPRGQ86SM5 289 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 IFNEQ86WN2 208 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 OR2M3Q8NG83 312 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 OR5D16Q8NGK9 328 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 XAGE5Q8WWM1 108 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 DMRTA2Q96SC8 542 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 SDF2Q99470 211 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 TIMP4Q99727 224 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 INPP5KQ9BT40 448 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 MRGBPQ9NV56 204 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 FBXO34Q9NWN3 711 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 COQ3Q9NZJ6 369 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 MED11Q9P086 117 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 FBXL2Q9UKC9 423 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 SLC6A5Q9Y345 797 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 KCNE3Q9Y6H6 103 aa15.72■□□□□ 0.11
SHKBP1-212ENST00000596163 IGLV3-32A0A0A0MS00 114 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 A0A0G2JND7 137 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 FAM47E-STBD1D6RA91 191 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 LINC01387J3KSC0 135 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 ADAM10O14672 748 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 GSNP06396 782 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 GUSBP08236 651 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 OR12D1P0DN82 309 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 BMP7P18075 431 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 CRYZQ08257 329 aaKnown RBP15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 ZNF630Q2M218 657 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 TIGD2Q4W5G0 525 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 C6orf10Q5SRN2 563 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 METTL21CQ5VZV1 264 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 TNFAIP8L2Q6P589 184 aaPredicted RBP15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 APOOLQ6UXV4 268 aa15.71■□□□□ 0.11
SHKBP1-212ENST00000596163 B3GNT6Q6ZMB0 384 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms