RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 ACAD8Q9UKU7 415 aa10.14□□□□□ -0.79
VRK3-210ENST00000596121 ABCG2Q9UNQ0 655 aa10.14□□□□□ -0.79
VRK3-210ENST00000596121 FAM215AQ9Y5M1 114 aa10.14□□□□□ -0.79
VRK3-210ENST00000596121 CENPVL1A0A0U1RR11 272 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 OR14I1A6ND48 311 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 CCDC154A6NI56 674 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 E9PLN8 166 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 FCMRO60667 390 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 OXSR1O95747 527 aaPredicted RBP10.13□□□□□ -0.79
VRK3-210ENST00000596121 TBXA2RP21731 343 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 MATN1P21941 496 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 UQCRC2P22695 453 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 TCEA1P23193 301 aaKnown RBP10.13□□□□□ -0.79
VRK3-210ENST00000596121 MRPL19P49406 292 aaKnown RBP10.13□□□□□ -0.79
VRK3-210ENST00000596121 FUT5Q11128 374 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 TOMM20Q15388 145 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 CD226Q15762 336 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 DPY19L1Q2PZI1 675 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 DCST2Q5T1A1 773 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.13□□□□□ -0.79
VRK3-210ENST00000596121 ZNF585AQ6P3V2 769 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 SEM1Q6ZVN7 128 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 MRGPRGQ86SM5 289 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 GATSQ8NAP1 163 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 GLB1L3Q8NCI6 653 aaPredicted RBP10.13□□□□□ -0.79
VRK3-210ENST00000596121 MIPOL1Q8TD10 442 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 ADAMTS15Q8TE58 950 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 RAB8BQ92930 207 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 MOAP1Q96BY2 351 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 ZNF524Q96C55 264 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 NEURL3Q96EH8 262 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 CHMP6Q96FZ7 201 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 SLC35G5Q96KT7 338 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 SDF2Q99470 211 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 NPAS1Q99742 590 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 VKORC1Q9BQB6 163 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 CCDC28BQ9BUN5 200 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 UGT2B28Q9BY64 529 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 OR51I1Q9H343 314 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 EXO5Q9H790 373 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 PLEKHB1Q9UF11 243 aaPredicted RBP10.13□□□□□ -0.79
VRK3-210ENST00000596121 KCNE5Q9UJ90 142 aa10.13□□□□□ -0.79
VRK3-210ENST00000596121 MRTO4Q9UKD2 239 aaKnown RBP10.13□□□□□ -0.79
VRK3-210ENST00000596121 FAF1Q9UNN5 650 aaPredicted RBP10.13□□□□□ -0.79
VRK3-210ENST00000596121 IGLV3-32A0A0A0MS00 114 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 C15orf38-AP3S2A0A0A6YYH1 394 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 ALG1L2C9J202 215 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 NPIPB9F8W1W9 429 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 BCKDKO14874 412 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 POLR3GO15318 223 aaPredicted RBP10.12□□□□□ -0.79
VRK3-210ENST00000596121 GMFGO60234 142 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 ANGPTL1O95841 491 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 NGFRP08138 427 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 OR12D1P0DN82 309 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 GLI4P10075 376 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 ESRRAP11474 423 aaPredicted RBP10.12□□□□□ -0.79
VRK3-210ENST00000596121 ACVR2AP27037 513 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
VRK3-210ENST00000596121 SRD5A2P31213 254 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 STARP49675 285 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 POLR2JP52435 117 aaKnown RBP10.12□□□□□ -0.79
VRK3-210ENST00000596121 MVDP53602 400 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 PSMD4P55036 377 aaKnown RBP10.12□□□□□ -0.79
VRK3-210ENST00000596121 CASP6P55212 293 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 GFRA1P56159 465 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 NUP107P57740 925 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 GUCY1A3Q02108 690 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 GTDC1Q4AE62 458 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 NHSL2Q5HYW2 709 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 COX20Q5RI15 118 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 HEPHL1Q6MZM0 1159 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 CGB2Q6NT52 195 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 TNFAIP8L2Q6P589 184 aaPredicted RBP10.12□□□□□ -0.79
VRK3-210ENST00000596121 ACAD11Q709F0 780 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 MIER2Q8N344 545 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 CHDHQ8NE62 594 aaPredicted RBP10.12□□□□□ -0.79
VRK3-210ENST00000596121 VPS37AQ8NEZ2 397 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 OR5M1Q8NGP8 315 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 PHF10Q8WUB8 498 aaKnown RBP10.12□□□□□ -0.79
VRK3-210ENST00000596121 SARAFQ96BY9 339 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 WDYHV1Q96HA8 205 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 ZBTB18Q99592 522 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 SLC35A5Q9BS91 424 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 TP63Q9H3D4 680 aaPredicted RBP10.12□□□□□ -0.79
VRK3-210ENST00000596121 ACBD3Q9H3P7 528 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 NPHS2Q9NP85 383 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 ALKBH4Q9NXW9 302 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 TAS2R10Q9NYW0 307 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 PPP4R1LQ9P1A2 415 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 DCTN4Q9UJW0 460 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 PCDHGB4Q9UN71 923 aa10.12□□□□□ -0.79
VRK3-210ENST00000596121 FAM234BA2RU67 622 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 SHISA8B8ZZ34 492 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 HMGN4O00479 90 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 TOXO94900 526 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 IL6P05231 212 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 HOXB9P17482 250 aaPredicted RBP10.11□□□□□ -0.79
VRK3-210ENST00000596121 DPP4P27487 766 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 ADH7P40394 386 aa10.11□□□□□ -0.79
VRK3-210ENST00000596121 PER3P56645 1201 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms