RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 HSD3B1P14060 373 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 KRT4P19013 534 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 NT5EP21589 574 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 IGFBP5P24593 272 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 HSD3B2P26439 372 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 CRHR1P34998 444 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 SLC6A8P48029 635 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 HTR6P50406 440 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 PKNOX1P55347 436 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 SLC18A2Q05940 514 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 CSTF3Q12996 717 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 TSC22D1Q15714 1073 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 ZNF672Q499Z4 452 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 CYB5R2Q6BCY4 276 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 OR52E8Q6IFG1 317 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 EMBQ6PCB8 327 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 PAGE2Q7Z2X7 111 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 C4orf33Q8N1A6 199 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 RIBC1Q8N443 379 aaPredicted RBP12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 C17orf47Q8NEP4 570 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 KBTBD8Q8NFY9 601 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 C12orf65Q9H3J6 166 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 CHODLQ9H9P2 273 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 WDR41Q9HAD4 459 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 AHSPQ9NZD4 102 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 BCAP29Q9UHQ4 241 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 GRID1Q9ULK0 1009 aa12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 MRPS18CQ9Y3D5 142 aaKnown RBP12.29□□□□□ -0.44
SHKBP1-208ENST00000595726 ESPNB1AK53 854 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 KRT6AP02538 564 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 KRT6BP04259 564 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 CD3EP07766 207 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 HMOX2P30519 316 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 CCT5P48643 541 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 KRT6CP48668 564 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 XKP51811 444 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 LOXL1Q08397 574 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 FAM120AOSQ5T036 256 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 NCMAPQ5T1S8 102 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 CCNYL2Q5T2Q4 361 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 PPP4R4Q6NUP7 873 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 FRMD7Q6ZUT3 714 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 ZNF619Q8N2I2 560 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 CCNYL1Q8N7R7 359 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 ADCY4Q8NFM4 1077 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 OR7G1Q8NGA0 311 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 METTL6Q8TCB7 284 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 C11orf24Q96F05 449 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 LCORQ96JN0 433 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 KCNA7Q96RP8 456 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 TRAF4Q9BUZ4 470 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 ACPTQ9BZG2 426 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 MANSC1Q9H8J5 431 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 FOLH1BQ9HBA9 442 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 BARX1Q9HBU1 254 aaPredicted RBP12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 MKS1Q9NXB0 559 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 B3GALT5Q9Y2C3 310 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 MALRD1Q5VYJ5 2156 aa12.28□□□□□ -0.44
SHKBP1-208ENST00000595726 CADP27708 2225 aa12.27□□□□□ -0.44
SHKBP1-208ENST00000595726 UQCRHLA0A096LP55 91 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 TLDC2A0PJX2 215 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 RAMP1O60894 148 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 NME6O75414 186 aaPredicted RBP12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 REM1O75628 298 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 NTN1O95631 604 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 ESRRBO95718 433 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 PGRP06401 933 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 ENO1P06733 434 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 CHN1P15882 459 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 EGR1P18146 543 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 GRK2P25098 689 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 PIK3R1P27986 724 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 NUDT6P53370 316 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 MAPK12P53778 367 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 FOXA1P55317 472 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 DNAJB13P59910 316 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 MGAT2Q10469 447 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 FGFBP1Q14512 234 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 LIPNQ5VXI9 398 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 RAET1LQ5VY80 246 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 BHLHB9Q6PI77 547 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 TRABD2AQ86V40 505 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 C1orf52Q8N6N3 182 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 CCDC63Q8NA47 563 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 TMBIM1Q969X1 311 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 S100PBPQ96BU1 408 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 APOPT1Q96IL0 206 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 COL21A1Q96P44 957 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 TACO1Q9BSH4 297 aaKnown RBP12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 MID1IP1Q9NPA3 183 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 OXSMQ9NWU1 459 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 NMRK1Q9NWW6 199 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 VPS29Q9UBQ0 182 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 LGALS13Q9UHV8 139 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 ZNF175Q9Y473 711 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 TIMM22Q9Y584 194 aa12.27□□□□□ -0.45
SHKBP1-208ENST00000595726 H3BML4 177 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 ULK1O75385 1050 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 CPA3P15088 417 aa12.26□□□□□ -0.45
SHKBP1-208ENST00000595726 EEFSECP57772 596 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms