RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 OXSR1O95747 527 aaPredicted RBP23.49■■□□□ 1.35
TRIM28-204ENST00000594806 OR12D1P0DN82 309 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 ENDOUP21128 410 aaKnown RBP23.49■■□□□ 1.35
TRIM28-204ENST00000594806 ADSLP30566 484 aaPredicted RBP23.49■■□□□ 1.35
TRIM28-204ENST00000594806 C4orf17Q53FE4 359 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 TNFAIP8L2Q6P589 184 aaPredicted RBP23.49■■□□□ 1.35
TRIM28-204ENST00000594806 CLEC18BQ6UXF7 455 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 CHERPQ8IWX8 916 aaKnown RBP23.49■■□□□ 1.35
TRIM28-204ENST00000594806 FAM26EQ8N5C1 309 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 CLEC18CQ8NCF0 446 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 RELTQ969Z4 430 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 SARAFQ96BY9 339 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 TPT1P8Q9HAU6 139 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 FBXO34Q9NWN3 711 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 THUMPD1Q9NXG2 353 aaKnown RBP23.49■■□□□ 1.35
TRIM28-204ENST00000594806 SLC5A6Q9Y289 635 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 UBR5O95071 2799 aaPredicted RBP23.49■■□□□ 1.35
TRIM28-204ENST00000594806 IGLV3-32A0A0A0MS00 114 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 C2orf72A6NCS6 295 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 ANGPTL1O95841 491 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 CELA3AP09093 270 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 CAPN3P20807 821 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 SRD5A2P31213 254 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 CA7P43166 264 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 ATP12AP54707 1039 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 HSF1Q00613 529 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 LRIF1Q5T3J3 769 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 SLC2A7Q6PXP3 512 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 MTERF4Q7Z6M4 381 aaKnown RBP23.48■■□□□ 1.35
TRIM28-204ENST00000594806 EID3Q8N140 333 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 NEIL3Q8TAT5 605 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 FAM57AQ8TBR7 257 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 NMUR2Q9GZQ4 415 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 PAIP1Q9H074 479 aaKnown RBP23.48■■□□□ 1.35
TRIM28-204ENST00000594806 NSRP1Q9H0G5 558 aaKnown RBP23.48■■□□□ 1.35
TRIM28-204ENST00000594806 EXO5Q9H790 373 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 PTGES2Q9H7Z7 377 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 LEF1Q9UJU2 399 aaPredicted RBP23.48■■□□□ 1.35
TRIM28-204ENST00000594806 PCDHB14Q9Y5E9 798 aa23.48■■□□□ 1.35
TRIM28-204ENST00000594806 ADAM10O14672 748 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 BCKDKO14874 412 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 NDUFB5O43674 189 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 MSX1P28360 303 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 GCKP35557 465 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 GANABQ14697 944 aaKnown RBP23.47■■□□□ 1.35
TRIM28-204ENST00000594806 TOMM20Q15388 145 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 FLYWCH1Q4VC44 716 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 DNAJC14Q6Y2X3 702 aaPredicted RBP23.47■■□□□ 1.35
TRIM28-204ENST00000594806 ZAR1Q86SH2 424 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 GALNT10Q86SR1 603 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 MARCH3Q86UD3 253 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 FADS6Q8N9I5 356 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 OR4K17Q8NGC6 315 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 DUSP19Q8WTR2 217 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 C10orf82Q8WW14 230 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 OR2B2Q9GZK3 357 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 ZNF350Q9GZX5 532 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 SLC6A13Q9NSD5 602 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 NDUFAF1Q9Y375 327 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 GMEB1Q9Y692 573 aa23.47■■□□□ 1.35
TRIM28-204ENST00000594806 NPIPB9F8W1W9 429 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 H3BNH8 94 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 HMGN4O00479 90 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 PPIBP23284 216 aaKnown RBP23.46■■□□□ 1.35
TRIM28-204ENST00000594806 LSP1P33241 339 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 DCTP40126 519 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 DSCR4P56555 118 aaPredicted RBP23.46■■□□□ 1.35
TRIM28-204ENST00000594806 PER3P56645 1201 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 APOOLQ6UXV4 268 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 FGD2Q7Z6J4 655 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 GCN1Q92616 2671 aaKnown RBP23.46■■□□□ 1.35
TRIM28-204ENST00000594806 PMM1Q92871 262 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 RAB8BQ92930 207 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 SAP130Q9H0E3 1048 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 LIPGQ9Y5X9 500 aa23.46■■□□□ 1.35
TRIM28-204ENST00000594806 TRGV8A0A0C4DH27 118 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 CLIC1O00299 241 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 ANGPT2O15123 496 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 SLC22A2O15244 555 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 SNRPB2P08579 225 aaKnown RBP23.45■■□□□ 1.34
TRIM28-204ENST00000594806 CASP9P55211 416 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 HPCAP84074 193 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 FADDQ13158 208 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 KLHL26Q53HC5 615 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 NHSL2Q5HYW2 709 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 MTFR2Q6P444 385 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 DPP10Q8N608 796 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 FAM83FQ8NEG4 500 aaPredicted RBP23.45■■□□□ 1.34
TRIM28-204ENST00000594806 OR2M3Q8NG83 312 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 ROPN1LQ96C74 230 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 TRNT1Q96Q11 434 aaKnown RBP23.45■■□□□ 1.34
TRIM28-204ENST00000594806 SAR1AQ9NR31 198 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 DTNAQ9Y4J8 743 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 MYO7BQ6PIF6 2116 aa23.45■■□□□ 1.34
TRIM28-204ENST00000594806 GMNCA6NCL1 334 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 HOXB9P17482 250 aaPredicted RBP23.44■■□□□ 1.34
TRIM28-204ENST00000594806 MVDP53602 400 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 MAPRE2Q15555 327 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 ZNF141Q15928 474 aa23.44■■□□□ 1.34
TRIM28-204ENST00000594806 C3AR1Q16581 482 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms