RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 WWTR1Q9GZV5 400 aa14.04□□□□□ -0.16
VRK3-207ENST00000594092 CACYBPQ9HB71 228 aaKnown RBP14.04□□□□□ -0.16
VRK3-207ENST00000594092 PDP1Q9P0J1 537 aaPredicted RBP14.04□□□□□ -0.16
VRK3-207ENST00000594092 ZNF223Q9UK11 482 aaPredicted RBP14.04□□□□□ -0.16
VRK3-207ENST00000594092 SDK2Q58EX2 2172 aa14.04□□□□□ -0.16
VRK3-207ENST00000594092 LOC102723996A0A087X1L8 192 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 M0R3H8 397 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 TNFRSF11BO00300 401 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 UGT2B17O75795 530 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 TNFSF15O95150 251 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 DBIP07108 87 aaKnown RBP14.03□□□□□ -0.16
VRK3-207ENST00000594092 THBS1P07996 1170 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 CD63P08962 238 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 CEACAM1P13688 526 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 IL7RP16871 459 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 PRKACGP22612 351 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 LARS2Q15031 903 aaKnown RBP14.03□□□□□ -0.16
VRK3-207ENST00000594092 RFX4Q33E94 735 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 KRT80Q6KB66 452 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 UGT2A3Q6UWM9 527 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 SLC29A4Q7RTT9 530 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 CYP4Z1Q86W10 505 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 TMPRSS12Q86WS5 348 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 MARCH9Q86YJ5 346 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 CLIP4Q8N3C7 705 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 CT55Q8WUE5 264 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 G6PC3Q9BUM1 346 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 NRSN2Q9GZP1 204 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 UBAP1Q9NZ09 502 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 KIF17Q9P2E2 1029 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 ZNF232Q9UNY5 417 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 SLC9A8Q9Y2E8 581 aa14.03□□□□□ -0.16
VRK3-207ENST00000594092 CNOT1A5YKK6 2376 aaKnown RBP14.03□□□□□ -0.16
VRK3-207ENST00000594092 CLDN24A6NM45 220 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 H0YAE9 185 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 LYNP07948 512 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 TCN2P20062 427 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 FOLR3P41439 243 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 NOVA1P51513 510 aaKnown RBP14.02□□□□□ -0.16
VRK3-207ENST00000594092 RAD23AP54725 363 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 CDH12P55289 794 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 EEF1A1P68104 462 aaKnown RBP14.02□□□□□ -0.16
VRK3-207ENST00000594092 NHLH1Q02575 133 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 DECR1Q16698 335 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.02□□□□□ -0.16
VRK3-207ENST00000594092 HLA-DQA1Q5Y7H0 255 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 TCTN3Q6NUS6 607 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 ZNF836Q6ZNA1 936 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 ZNF605Q86T29 641 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 ZNF441Q8N8Z8 693 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 ARHGDIGQ99819 225 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 RLIMQ9NVW2 624 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 SLC13A4Q9UKG4 626 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 LYVE1Q9Y5Y7 322 aa14.02□□□□□ -0.16
VRK3-207ENST00000594092 EIF4E1BA6NMX2 242 aaKnown RBP14.01□□□□□ -0.17
VRK3-207ENST00000594092 SEMA7AO75326 666 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 RAB40ALP0C0E4 278 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 NID1P14543 1247 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 MYF6P23409 242 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 IGFBP5P24593 272 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 NR0B1P51843 470 aaKnown RBP14.01□□□□□ -0.17
VRK3-207ENST00000594092 SLC26A5P58743 744 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 RNF4P78317 190 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 GK3PQ14409 553 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 LAPTM4AQ15012 233 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 PCOLCEQ15113 449 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 ZIK1Q3SY52 487 aaPredicted RBP14.01□□□□□ -0.17
VRK3-207ENST00000594092 LIN52Q52LA3 116 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 HSDL2Q6YN16 418 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 DEF8Q6ZN54 512 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 ESX1Q8N693 406 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 OR6T1Q8NGN1 323 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 VMP1Q96GC9 406 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 BARD1Q99728 777 aaKnown RBP14.01□□□□□ -0.17
VRK3-207ENST00000594092 B3GNT4Q9C0J1 378 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 TOR3AQ9H497 397 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 SCOCQ9UIL1 159 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 PCDHGA10Q9Y5H3 936 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 HS3ST3B1Q9Y662 390 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 NPIPB9F8W1W9 429 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 FFAR1O14842 300 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 TO15178 435 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 FRS3O43559 492 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 GADD45GO95257 159 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 IL33O95760 270 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 ADARB1P78563 741 aaKnown RBP14.01□□□□□ -0.17
VRK3-207ENST00000594092 GANABQ14697 944 aaKnown RBP14.01□□□□□ -0.17
VRK3-207ENST00000594092 NPTX1Q15818 432 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 EIPR1Q53HC9 387 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 PDZK1Q5T2W1 519 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 ATG16L2Q8NAA4 619 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 C17orf47Q8NEP4 570 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 ZNF555Q8NEP9 628 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 EFHD2Q96C19 240 aaPredicted RBP14.01□□□□□ -0.17
VRK3-207ENST00000594092 KLHL28Q9NXS3 571 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 KCND3Q9UK17 655 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 TCFL5Q9UL49 500 aa14.01□□□□□ -0.17
VRK3-207ENST00000594092 AHCTF1Q8WYP5 2266 aa14□□□□□ -0.17
VRK3-207ENST00000594092 CDC14CA4D256 554 aa14□□□□□ -0.17
VRK3-207ENST00000594092 DLL1O00548 723 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms