RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 NCCRP1Q6ZVX7 275 aaPredicted RBP13.25□□□□□ -0.29
VRK3-206ENST00000594090 YRDCQ86U90 279 aaKnown RBP13.25□□□□□ -0.29
VRK3-206ENST00000594090 TRIML2Q8N7C3 387 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 FADS6Q8N9I5 356 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 OR2M3Q8NG83 312 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 OR4C3Q8NH37 302 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 RFWD2Q8NHY2 731 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 MIPOL1Q8TD10 442 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 PHF10Q8WUB8 498 aaKnown RBP13.25□□□□□ -0.29
VRK3-206ENST00000594090 DTNBP1Q96EV8 351 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 DMRTA2Q96SC8 542 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 VKORC1Q9BQB6 163 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 OR51I1Q9H343 314 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 UBQLN4Q9NRR5 601 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 DCTN4Q9UJW0 460 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 ACAD8Q9UKU7 415 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 SLC6A5Q9Y345 797 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 PCDHGB3Q9Y5G1 929 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 DUXAA6NLW8 204 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 FIGNL2A6NMB9 653 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 RFXANKO14593 260 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 ANGPTL1O95841 491 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 ATP6V1C1P21283 382 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 CASP9P55211 416 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 CRYZQ08257 329 aaKnown RBP13.24□□□□□ -0.29
VRK3-206ENST00000594090 TIGD2Q4W5G0 525 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 NHSL2Q5HYW2 709 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 RPTNQ6XPR3 784 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 DNAJC14Q6Y2X3 702 aaPredicted RBP13.24□□□□□ -0.29
VRK3-206ENST00000594090 MSANTD1Q6ZTZ1 278 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 CHDHQ8NE62 594 aaPredicted RBP13.24□□□□□ -0.29
VRK3-206ENST00000594090 DUSP19Q8WTR2 217 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 ITLN2Q8WWU7 325 aaPredicted RBP13.24□□□□□ -0.29
VRK3-206ENST00000594090 SIKE1Q9BRV8 207 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 DSN1Q9H410 356 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 DKKL1Q9UK85 242 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 FREM3P0C091 2139 aa13.24□□□□□ -0.29
VRK3-206ENST00000594090 IGLV3-32A0A0A0MS00 114 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 NPIPA5A0A0B4J1W7 369 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 A1L4Q6 167 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 NPIPA7E9PJI5 369 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 NDUFB5O43674 189 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 WDR1O75083 606 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 DNAJC13O75165 2243 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 AK1P00568 194 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 C1QCP02747 245 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 GSNP06396 782 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 NPIPA8P0DM63 369 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 HPGDP15428 266 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 ACVR2AP27037 513 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 DPP4P27487 766 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 DCTP40126 519 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 KHKP50053 298 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 ATP4BP51164 291 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 DSCR4P56555 118 aaPredicted RBP13.23□□□□□ -0.29
VRK3-206ENST00000594090 IRX1P78414 480 aaPredicted RBP13.23□□□□□ -0.29
VRK3-206ENST00000594090 GUCY1A3Q02108 690 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 C17orf67Q0P5P2 114 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 RCAN2Q14206 197 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 ZNF585AQ6P3V2 769 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 TNFAIP8L2Q6P589 184 aaPredicted RBP13.23□□□□□ -0.29
VRK3-206ENST00000594090 ZNF621Q6ZSS3 439 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 IFNEQ86WN2 208 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 RPRMLQ8N4K4 120 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 MARVELD2Q8N4S9 558 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 GATSQ8NAP1 163 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 OR14L1PQ8NHC6 308 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 VPS33AQ96AX1 596 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 ITCHQ96J02 903 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 SDF2Q99470 211 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 UGT2B28Q9BY64 529 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 RMND5AQ9H871 391 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 TAS2R10Q9NYW0 307 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 MED11Q9P086 117 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 MRPS18CQ9Y3D5 142 aaKnown RBP13.23□□□□□ -0.29
VRK3-206ENST00000594090 DOPEY2Q9Y3R5 2298 aa13.23□□□□□ -0.29
VRK3-206ENST00000594090 NCOA6Q14686 2063 aaPredicted RBP13.23□□□□□ -0.29
VRK3-206ENST00000594090 USP9XQ93008 2570 aaPredicted RBP13.22□□□□□ -0.29
VRK3-206ENST00000594090 A0A0G2JND7 137 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 A0A1W2PQD3 144 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 NPIPB9F8W1W9 429 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 SCDO00767 359 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 CLDN1O95832 211 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 AGR2O95994 175 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 ACTL6AO96019 429 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 OR12D1P0DN82 309 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 BMP7P18075 431 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 FUT5Q11128 374 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 SQLEQ14534 574 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 GANABQ14697 944 aaKnown RBP13.22□□□□□ -0.29
VRK3-206ENST00000594090 ARHGAP11BQ3KRB8 267 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 FLYWCH1Q4VC44 716 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 DCST1Q5T197 706 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 VASNQ6EMK4 673 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 HEPHL1Q6MZM0 1159 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 C16orf62Q7Z3J2 963 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 RNF130Q86XS8 419 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 FUNDC1Q8IVP5 155 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 ZNF527Q8NB42 609 aa13.22□□□□□ -0.29
VRK3-206ENST00000594090 ABTB1Q969K4 478 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms