RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 RGNQ15493 299 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 GPAT3Q53EU6 434 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 KRTCAP3Q53RY4 240 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 CMPK2Q5EBM0 449 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 COQ5Q5HYK3 327 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 GKAP1Q5VSY0 366 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-221ENST00000593026 FNDC7Q5VTL7 733 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 TIGD3Q6B0B8 471 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 REP15Q6BDI9 236 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 BNC2Q6ZN30 1099 aaPredicted RBP13.64□□□□□ -0.23
DDX39A-221ENST00000593026 MARCH3Q86UD3 253 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 GALNT11Q8NCW6 608 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 RP9Q8TA86 221 aaKnown RBP13.64□□□□□ -0.23
DDX39A-221ENST00000593026 GPR137Q96N19 417 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 GNRHR2Q96P88 292 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 CCDC106Q9BWC9 280 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 ZNF350Q9GZX5 532 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 HOXD1Q9GZZ0 328 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 MYLK2Q9H1R3 596 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 ZDHHC11Q9H8X9 412 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 POLE3Q9NRF9 147 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 SDHAF3Q9NRP4 125 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 THUMPD1Q9NXG2 353 aaKnown RBP13.64□□□□□ -0.23
DDX39A-221ENST00000593026 PPP4R1LQ9P1A2 415 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 P2RX2Q9UBL9 471 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 SEC14L3Q9UDX4 400 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 CORO2BQ9UQ03 480 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 C15orf41Q9Y2V0 281 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 WDR45Q9Y484 360 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 SHANK1Q9Y566 2161 aa13.64□□□□□ -0.23
DDX39A-221ENST00000593026 GCN1Q92616 2671 aaKnown RBP13.63□□□□□ -0.23
DDX39A-221ENST00000593026 NPIPA5A0A0B4J1W7 369 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 PRAMEF27A3QJZ7 478 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 TMEM247A6NEH6 219 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 EVPLLA8MZ36 301 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 NPIPA7E9PJI5 369 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 FCMRO60667 390 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 DCTN3O75935 186 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 ANGPTL1O95841 491 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 NPIPA8P0DM63 369 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 NR2F1P10589 423 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 GDF1P27539 372 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 DCTP40126 519 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 ATP12AP54707 1039 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 ELOAQ14241 798 aaKnown RBP13.63□□□□□ -0.23
DDX39A-221ENST00000593026 GPR68Q15743 365 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 SYPL1Q16563 259 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 TRMT5Q32P41 509 aaKnown RBP13.63□□□□□ -0.23
DDX39A-221ENST00000593026 RUNDC3AQ59EK9 446 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 APOOLQ6UXV4 268 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 OLIG3Q7RTU3 272 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 PLCZ1Q86YW0 608 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 GHDCQ8N2G8 530 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 POU5F2Q8N7G0 328 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 ANKFN1Q8N957 763 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 PCYOX1LQ8NBM8 494 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 ST6GALNAC3Q8NDV1 305 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 ANKRD27Q96NW4 1050 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 TRNT1Q96Q11 434 aaKnown RBP13.63□□□□□ -0.23
DDX39A-221ENST00000593026 CGREF1Q99674 301 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 CPPED1Q9BRF8 314 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-221ENST00000593026 RTN4RQ9BZR6 473 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 DEFB127Q9H1M4 99 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 QPCTLQ9NXS2 382 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 MKLN1Q9UL63 735 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 GMEB1Q9Y692 573 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 NINQ8N4C6 2090 aa13.63□□□□□ -0.23
DDX39A-221ENST00000593026 A0A1W2PQD3 144 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 ANKUB1A6NFN9 424 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 NPIPB9F8W1W9 429 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 ADAM10O14672 748 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 NDUFB5O43674 189 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 KIAA0513O60268 411 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 CDC40O60508 579 aaKnown RBP eCLIP13.62□□□□□ -0.23
DDX39A-221ENST00000593026 CBR3O75828 277 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 WISP2O76076 250 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 ZIC2O95409 532 aaPredicted RBP13.62□□□□□ -0.23
DDX39A-221ENST00000593026 H6PDO95479 791 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 CBX6O95503 412 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 GUSBP08236 651 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 COX4I1P13073 169 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 C17orf67Q0P5P2 114 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 CAPRIN1Q14444 709 aaKnown RBP13.62□□□□□ -0.23
DDX39A-221ENST00000593026 SLC10A1Q14973 349 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 TOMM20Q15388 145 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 OR5M10Q6IEU7 315 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 GFRALQ6UXV0 394 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 FRRS1Q6ZNA5 592 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 TREML1Q86YW5 311 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 ZNF614Q8N883 585 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 WDSUB1Q8N9V3 476 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 GATSQ8NAP1 163 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 RCN3Q96D15 328 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 DTNBP1Q96EV8 351 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 THUMPD3Q9BV44 507 aaKnown RBP13.62□□□□□ -0.23
DDX39A-221ENST00000593026 UBQLN3Q9H347 655 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 IKZF5Q9H5V7 419 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 HHATLQ9HCP6 504 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 GID8Q9NWU2 228 aa13.62□□□□□ -0.23
DDX39A-221ENST00000593026 HRH3Q9Y5N1 445 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms