RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 RPS26P62854 115 aaKnown RBP10.84□□□□□ -0.67
LIG3-213ENST00000590630 TXNL4AP83876 142 aaKnown RBP10.84□□□□□ -0.67
LIG3-213ENST00000590630 GUCY1A3Q02108 690 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 C17orf67Q0P5P2 114 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 RCAN2Q14206 197 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 TIGD2Q4W5G0 525 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 DCST2Q5T1A1 773 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 CCNJQ5T5M9 372 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 GALNT10Q86SR1 603 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 CD163Q86VB7 1156 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 CLEC4FQ8N1N0 589 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 FAM83FQ8NEG4 500 aaPredicted RBP10.84□□□□□ -0.67
LIG3-213ENST00000590630 OR5D16Q8NGK9 328 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 OR4C3Q8NH37 302 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 ITCHQ96J02 903 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 VKORC1Q9BQB6 163 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 INPP5KQ9BT40 448 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 SLC6A15Q9H2J7 730 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 TP63Q9H3D4 680 aaPredicted RBP10.84□□□□□ -0.67
LIG3-213ENST00000590630 SERHL2Q9H4I8 314 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 RABEP2Q9H5N1 569 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 EXD2Q9NVH0 621 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 DCTN4Q9UJW0 460 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 ACAD8Q9UKU7 415 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 MEMO1Q9Y316 297 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 MRPS18CQ9Y3D5 142 aaKnown RBP10.84□□□□□ -0.67
LIG3-213ENST00000590630 CENPEQ02224 2701 aa10.84□□□□□ -0.67
LIG3-213ENST00000590630 CACNA1CQ13936 2221 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 IGLV3-32A0A0A0MS00 114 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 C15orf38-AP3S2A0A0A6YYH1 394 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 A0A0G2JND7 137 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 A0A1W2PQD3 144 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 FIGNL2A6NMB9 653 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 SCDO00767 359 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 NDUFB5O43674 189 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 ZIC2O95409 532 aaPredicted RBP10.83□□□□□ -0.68
LIG3-213ENST00000590630 ANGPTL1O95841 491 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 ZCCHC18P0CG32 403 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 TROVE2P10155 538 aaKnown RBP eCLIP10.83□□□□□ -0.68
LIG3-213ENST00000590630 SRD5A2P31213 254 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 CDKN2CP42773 168 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 MAGEA8P43361 318 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 TRPC1P48995 793 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 KHKP50053 298 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 ANXA11P50995 505 aaKnown RBP10.83□□□□□ -0.68
LIG3-213ENST00000590630 SQLEQ14534 574 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 GANABQ14697 944 aaKnown RBP10.83□□□□□ -0.68
LIG3-213ENST00000590630 GXYLT1Q4G148 440 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 NHSL2Q5HYW2 709 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 EMC4Q5J8M3 183 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 ATAD3BQ5T9A4 648 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 WLSQ5T9L3 541 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 METTL21CQ5VZV1 264 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 OR5M10Q6IEU7 315 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 RPTNQ6XPR3 784 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 ZNF621Q6ZSS3 439 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 C16orf62Q7Z3J2 963 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 ZAR1Q86SH2 424 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 MARCH3Q86UD3 253 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 MISPQ8IVT2 679 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 FADS6Q8N9I5 356 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 ZNF527Q8NB42 609 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 CHDHQ8NE62 594 aaPredicted RBP10.83□□□□□ -0.68
LIG3-213ENST00000590630 OR4K17Q8NGC6 315 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 OR14L1PQ8NHC6 308 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 RFWD2Q8NHY2 731 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 PHF10Q8WUB8 498 aaKnown RBP10.83□□□□□ -0.68
LIG3-213ENST00000590630 VPS33AQ96AX1 596 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 THOC1Q96FV9 657 aaKnown RBP10.83□□□□□ -0.68
LIG3-213ENST00000590630 CCDC120Q96HB5 630 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 RTN4RQ9BZR6 473 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 OR2B2Q9GZK3 357 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 HOXD1Q9GZZ0 328 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 OR51I1Q9H343 314 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 PTGES2Q9H7Z7 377 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 FGFR1OP2Q9NVK5 253 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 FBXO34Q9NWN3 711 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 TAS2R10Q9NYW0 307 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 SPRR3Q9UBC9 169 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 DKKL1Q9UK85 242 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 FBXL2Q9UKC9 423 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 HRH3Q9Y5N1 445 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 KCNE3Q9Y6H6 103 aa10.83□□□□□ -0.68
LIG3-213ENST00000590630 ZG16O60844 167 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 WDR1O75083 606 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 STX11O75558 287 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 ANP32DO95626 131 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 KRT75O95678 551 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 ACTL6AO96019 429 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 GUSBP08236 651 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 VIMP08670 466 aaKnown RBP10.82□□□□□ -0.68
LIG3-213ENST00000590630 HOXD4P09016 255 aaPredicted RBP10.82□□□□□ -0.68
LIG3-213ENST00000590630 RNF224P0DH78 156 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 NCF2P19878 526 aaPredicted RBP10.82□□□□□ -0.68
LIG3-213ENST00000590630 ACVR2AP27037 513 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 DPP4P27487 766 aa10.82□□□□□ -0.68
LIG3-213ENST00000590630 MDH1P40925 334 aaKnown RBP10.82□□□□□ -0.68
LIG3-213ENST00000590630 DSCR4P56555 118 aaPredicted RBP10.82□□□□□ -0.68
LIG3-213ENST00000590630 CRYZQ08257 329 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms