RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 PRRC2BQ5JSZ5 2229 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 EIF4EBP2Q13542 120 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 FIGLAQ6QHK4 219 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 SMPDL3BQ92485 455 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 PITX2Q99697 317 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 EPHX3Q9H6B9 360 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 SIRT5Q9NXA8 310 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 CACNG2Q9Y698 323 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 SMAD9O15198 467 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 AK1P00568 194 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 CTGFP29279 349 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 MRPL43Q8N983 215 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 SERINC2Q96SA4 455 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 ZNF717Q9BY31 904 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 USP36Q9P275 1121 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 MAB21L2Q9Y586 359 aa16.09■□□□□ 0.17
SMARCA4-215ENST00000590574 GPX5O75715 221 aa16.08■□□□□ 0.17
SMARCA4-215ENST00000590574 BAIAP2L2Q6UXY1 529 aa16.08■□□□□ 0.17
SMARCA4-215ENST00000590574 OR6T1Q8NGN1 323 aa16.08■□□□□ 0.17
SMARCA4-215ENST00000590574 PRR14Q9BWN1 585 aa16.08■□□□□ 0.17
SMARCA4-215ENST00000590574 EXO5Q9H790 373 aa16.08■□□□□ 0.17
SMARCA4-215ENST00000590574 TRIM3O75382 744 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 MAGEA2P43356 314 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 REEP5Q00765 189 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 SCGB2B2Q4G0G5 96 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 PYHIN1Q6K0P9 492 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 IL20RBQ6UXL0 311 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 CCDC36Q8IYA8 594 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 DNAJA3Q96EY1 480 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 FAM83CQ9BQN1 747 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 G6PC3Q9BUM1 346 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 C1QTNF2Q9BXJ5 285 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 ZBP1Q9H171 429 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 TM7SF3Q9NS93 570 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 NUDT15Q9NV35 164 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 MBD2Q9UBB5 411 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 DRD5P21918 477 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 ADH7P40394 386 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 RPS5P46782 204 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 GPR143P51810 404 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 SF3B4Q15427 424 aaKnown RBP eCLIP16.08■□□□□ 0.163e-7■■■■■ 27.6
SMARCA4-215ENST00000590574 PPP2R2DQ66LE6 453 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 PAQR7Q86WK9 346 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 OR8S1Q8NH09 359 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 CCDC107Q8WV48 283 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 ZMYND19Q96E35 227 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 AMDHD1Q96NU7 426 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 PRTFDC1Q9NRG1 225 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 UBQLN2Q9UHD9 624 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 SLC1A3P43003 542 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 ZNF750Q32MQ0 723 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 PUS10Q3MIT2 529 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 B3GLCTQ6Y288 498 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 ATCAYQ86WG3 371 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 CLDN22Q8N7P3 220 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 TAPBPLQ9BX59 468 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 ACTR6Q9GZN1 396 aa16.08■□□□□ 0.16
SMARCA4-215ENST00000590574 BMP1P13497 986 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 P2RY2P41231 377 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 NUP54Q7Z3B4 507 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 LILRB4Q8NHJ6 448 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 BADQ92934 168 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 NEURL2Q9BR09 285 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 GTPBP2Q9BX10 602 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 BTBD2Q9BX70 525 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 CDCA4Q9BXL8 241 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 C11orf54Q9H0W9 315 aaPredicted RBP16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 OR10A4Q9H209 315 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 MAU2Q9Y6X3 613 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 MMP11P24347 488 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 PTGS2P35354 604 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 ERVFC1P60507 584 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 CCDC157Q569K6 752 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 ZC3H14Q6PJT7 736 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 GDPD3Q7L5L3 318 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 SDR16C5Q8N3Y7 309 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 NANOGP1Q8N7R0 232 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 IL21RQ9HBE5 538 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 SRA1Q9HD15 236 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 RASD1Q9Y272 281 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 POLR2AP24928 1970 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 ZAR1LA6NP61 321 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 ZNF24P17028 368 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 ATP5A1P25705 553 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 HES5Q5TA89 166 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 SAXO2Q658L1 398 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 TMED4Q7Z7H5 227 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 NLRP8Q86W28 1048 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 GAL3ST3Q96A11 431 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 SFXN1Q9H9B4 322 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 BABAM2Q9NXR7 383 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 KLHL21Q9UJP4 597 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 KDM4BO94953 1096 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 PRSS23O95084 383 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 GYPBP06028 91 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 APEX1P27695 318 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 MEPCEQ7L2J0 689 aaKnown RBP16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 JAGN1Q8N5M9 183 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 C4orf36Q96KX1 117 aa16.07■□□□□ 0.16
SMARCA4-215ENST00000590574 POLMQ9NP87 494 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms