RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 PMM1Q92871 262 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 REXO5Q96IC2 774 aaKnown RBP12.5□□□□□ -0.41
VMP1-210ENST00000589823 ZNF583Q96ND8 569 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 UBL7Q96S82 380 aaPredicted RBP12.5□□□□□ -0.41
VMP1-210ENST00000589823 CDRT15Q96T59 188 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 OSBPL11Q9BXB4 747 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 MFRPQ9BY79 579 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 TBL1XR1Q9BZK7 514 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 SAP130Q9H0E3 1048 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 SLC38A1Q9H2H9 487 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 ALG2Q9H553 416 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 MTHFD2LQ9H903 347 aaPredicted RBP12.5□□□□□ -0.41
VMP1-210ENST00000589823 SH2D2AQ9NP31 389 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 TAS2R1Q9NYW7 299 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 CNOT11Q9UKZ1 510 aaKnown RBP12.5□□□□□ -0.41
VMP1-210ENST00000589823 ABCG2Q9UNQ0 655 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 B3GNT3Q9Y2A9 372 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 PCDHGB6Q9Y5F9 930 aa12.5□□□□□ -0.41
VMP1-210ENST00000589823 NPIPA5A0A0B4J1W7 369 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 ELOVL7A1L3X0 281 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 ANKRD33BA6NCL7 494 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 NPIPA7E9PJI5 369 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 NME2P1O60361 137 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 PGM3O95394 542 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 OXSR1O95747 527 aaPredicted RBP12.49□□□□□ -0.41
VMP1-210ENST00000589823 NGFRP08138 427 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 NPIPA8P0DM63 369 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 CNR1P21554 472 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 TBXA2RP21731 343 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 NME2P22392 152 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 PCGF2P35227 344 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 CASP3P42574 277 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 KCNJ2P63252 427 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 SNTA1Q13424 505 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 DNAL1Q4LDG9 190 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 RPS26P11Q5JNZ5 115 aaPredicted RBP12.49□□□□□ -0.41
VMP1-210ENST00000589823 INTS11Q5TA45 600 aaKnown RBP12.49□□□□□ -0.41
VMP1-210ENST00000589823 TYW3Q6IPR3 259 aaKnown RBP12.49□□□□□ -0.41
VMP1-210ENST00000589823 SLC30A6Q6NXT4 461 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 OLIG3Q7RTU3 272 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 GALNTL5Q7Z4T8 443 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 KRT73Q86Y46 540 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 PEX5LQ8IYB4 626 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 MICU2Q8IYU8 434 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 ARHGAP24Q8N264 748 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 ZNF614Q8N883 585 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 TEX19Q8NA77 164 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 FAM98AQ8NCA5 519 aaKnown RBP12.49□□□□□ -0.41
VMP1-210ENST00000589823 TNIP2Q8NFZ5 429 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 OR4C3Q8NH37 302 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 OIT3Q8WWZ8 545 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 SCMH1Q96GD3 660 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 ZNF607Q96SK3 696 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 KCTD14Q9BQ13 255 aaPredicted RBP12.49□□□□□ -0.41
VMP1-210ENST00000589823 TREX2Q9BQ50 279 aaPredicted RBP12.49□□□□□ -0.41
VMP1-210ENST00000589823 DOHHQ9BU89 302 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 HES7Q9BYE0 225 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 RUBCNLQ9H714 662 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 BCL2L10Q9HD36 194 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 FLRT3Q9NZU0 649 aa12.49□□□□□ -0.41
VMP1-210ENST00000589823 SUCOQ9UBS9 1254 aaKnown RBP12.49□□□□□ -0.41
VMP1-210ENST00000589823 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.49□□□□□ -0.41
VMP1-210ENST00000589823 G3V3Y1 287 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 H3BNH8 94 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 KLRC4-KLRK1H3BQV0 150 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 GSTA4O15217 222 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 SCO2O43819 266 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 PEX1O43933 1283 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 FADS1O60427 444 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 PDE9AO76083 593 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 SNX4O95219 450 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 ZIC2O95409 532 aaPredicted RBP12.48□□□□□ -0.41
VMP1-210ENST00000589823 GSK3BP49841 420 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 VEZF1Q14119 521 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 LY6DQ14210 128 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 MAPK11Q15759 364 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 ZNF141Q15928 474 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 SPATS1Q496A3 300 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 AP1ARQ63HQ0 302 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 SLC6A19Q695T7 634 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 BICRALQ6AI39 1079 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 POGLUT1Q8NBL1 392 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 GRHL3Q8TE85 626 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 SLC7A6OSQ96CW6 309 aaPredicted RBP12.48□□□□□ -0.41
VMP1-210ENST00000589823 FAM173AQ9BQD7 235 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 BTBD10Q9BSF8 475 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 SPATA5L1Q9BVQ7 753 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 ANGPTL4Q9BY76 406 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 HHATLQ9HCP6 504 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 SDHAF3Q9NRP4 125 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 PRPF19Q9UMS4 504 aaKnown RBP12.48□□□□□ -0.41
VMP1-210ENST00000589823 ZNF232Q9UNY5 417 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 USP22Q9UPT9 525 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 DTNAQ9Y4J8 743 aa12.48□□□□□ -0.41
VMP1-210ENST00000589823 TNRC6AQ8NDV7 1962 aaKnown RBP12.48□□□□□ -0.41
VMP1-210ENST00000589823 DSPPQ9NZW4 1301 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 CACNA1GO43497 2377 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 A0A1W2PQD3 144 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 PRORSD1PA6NEY8 169 aa12.47□□□□□ -0.41
VMP1-210ENST00000589823 AGAP5A6NIR3 686 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms