RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 ATP5F1P24539 256 aaPredicted RBP12.55□□□□□ -0.4
VMP1-209ENST00000588915 NCBP2P52298 156 aaKnown RBP eCLIP12.55□□□□□ -0.45e-11■□□□□ 10
VMP1-209ENST00000588915 PRKAA2P54646 552 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 NAA20P61599 178 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.55□□□□□ -0.4
VMP1-209ENST00000588915 UBAP2Q5T6F2 1119 aaKnown RBP12.55□□□□□ -0.4
VMP1-209ENST00000588915 ANKRD34AQ69YU3 496 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 FAM71E1Q6IPT2 247 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 BEND4Q6ZU67 534 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 MARCH3Q86UD3 253 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 GGNQ86UU5 652 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 EXOC3L1Q86VI1 746 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 ELP4Q96EB1 424 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 L3HYPDHQ96EM0 354 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 METTL2AQ96IZ6 378 aaKnown RBP12.55□□□□□ -0.4
VMP1-209ENST00000588915 TMEM237Q96Q45 408 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 TMEM204Q9BSN7 226 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 PRRG4Q9BZD6 226 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 TBL1XR1Q9BZK7 514 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 RTN4RQ9BZR6 473 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 GLIPR2Q9H4G4 154 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 MIEF1Q9NQG6 463 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 DDX18Q9NVP1 670 aaKnown RBP12.55□□□□□ -0.4
VMP1-209ENST00000588915 TMEM216Q9P0N5 145 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 MCTS1Q9ULC4 181 aaKnown RBP12.55□□□□□ -0.4
VMP1-209ENST00000588915 GPR52Q9Y2T5 361 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 HEATR5AQ86XA9 2040 aa12.55□□□□□ -0.4
VMP1-209ENST00000588915 PCNX3Q9H6A9 2034 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 A0A087WUV0 522 aaPredicted RBP12.54□□□□□ -0.4
VMP1-209ENST00000588915 UQCRHLA0A096LP55 91 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 INAFM1C9JVW0 142 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 AQP8O94778 261 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 ANGPTL1O95841 491 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 NTSP30990 170 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 HTR6P50406 440 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 CTBP2P56545 445 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 STX5Q13190 355 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 GTF2IRD2BQ6EKJ0 949 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 TMEM107Q6UX40 140 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 SYT10Q6XYQ8 523 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 STAC2Q6ZMT1 411 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 ZNF704Q6ZNC4 412 aaPredicted RBP12.54□□□□□ -0.4
VMP1-209ENST00000588915 GTF2IRD2Q86UP8 949 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 STK32CQ86UX6 486 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 WDR75Q8IWA0 830 aaKnown RBP12.54□□□□□ -0.4
VMP1-209ENST00000588915 OR5M1Q8NGP8 315 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 ZBTB8AQ96BR9 441 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 FMO2Q99518 471 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 MYNNQ9NPC7 610 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 FLRT3Q9NZU0 649 aa12.54□□□□□ -0.4
VMP1-209ENST00000588915 C7orf72A4D263 438 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 ALG1L2C9J202 215 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 HS3ST1O14792 307 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 ADAMDEC1O15204 470 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 UTS2O95399 124 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 PLGP00747 810 aaPredicted RBP12.53□□□□□ -0.4
VMP1-209ENST00000588915 NGFRP08138 427 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 PSMB1P20618 241 aaKnown RBP12.53□□□□□ -0.4
VMP1-209ENST00000588915 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
VMP1-209ENST00000588915 RAC1P63000 192 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 BTKQ06187 659 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 ETFDHQ16134 617 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 EXOC3L2Q2M3D2 409 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 VPS26BQ4G0F5 336 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 SPDYAQ5MJ70 313 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 PDSS1Q5T2R2 415 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 CPTPQ5TA50 214 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 ADAM5Q6NVV9 412 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 IKBIPQ70UQ0 350 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 TRIM46Q7Z4K8 759 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 GTPBP8Q8N3Z3 284 aaPredicted RBP12.53□□□□□ -0.4
VMP1-209ENST00000588915 MMGT1Q8N4V1 131 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 LRRN4CLQ8ND94 238 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 CEP70Q8NHQ1 597 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 ACTRT2Q8TDY3 377 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 HOXB13Q92826 284 aaPredicted RBP12.53□□□□□ -0.4
VMP1-209ENST00000588915 ZNF764Q96H86 408 aaPredicted RBP12.53□□□□□ -0.4
VMP1-209ENST00000588915 ADGRG7Q96K78 797 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 AMDHD1Q96NU7 426 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 HDHD5Q9BXW7 423 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 IQCGQ9H095 443 aaKnown RBP12.53□□□□□ -0.4
VMP1-209ENST00000588915 TIMM22Q9Y584 194 aa12.53□□□□□ -0.4
VMP1-209ENST00000588915 USF3Q68DE3 2245 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 EIF1AYO14602 144 aaKnown RBP12.52□□□□□ -0.41
VMP1-209ENST00000588915 CRLF1O75462 422 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 SOX30O94993 753 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 NKX2-2O95096 273 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 SYNGR4O95473 234 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 GSTA1P08263 222 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 PABPC4LP0CB38 370 aaKnown RBP12.52□□□□□ -0.41
VMP1-209ENST00000588915 PRPS2P11908 318 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 LCN1P31025 176 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 GABRA3P34903 492 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 MAP3K8P41279 467 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 ATP5J2P56134 94 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 SLC29A2Q14542 456 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 PRSS53Q2L4Q9 553 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 APOOLQ6UXV4 268 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 ESPNLQ6ZVH7 1005 aa12.52□□□□□ -0.41
VMP1-209ENST00000588915 CXXC5Q7LFL8 322 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms