RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ARHGAP11AQ6P4F7 1023 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 C10orf82Q8WW14 230 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 SLC6A15Q9H2J7 730 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 UBQLN4Q9NRR5 601 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 FBXL2Q9UKC9 423 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 PCDHB14Q9Y5E9 798 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 COL12A1Q99715 3063 aa18.41■□□□□ 0.54
DDX39A-207ENST00000588542 DIDO1Q9BTC0 2240 aaKnown RBP18.41■□□□□ 0.54
DDX39A-207ENST00000588542 TRGV5A0A0B4J1U4 118 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 ALG1L2C9J202 215 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 NPIPB9F8W1W9 429 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 HMGN4O00479 90 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 HCN1O60741 890 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 CBR3O75828 277 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 ZIC2O95409 532 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-207ENST00000588542 ANP32DO95626 131 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 PTGS2P35354 604 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 KHKP50053 298 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 SEC24CP53992 1094 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 FUT5Q11128 374 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 C3AR1Q16581 482 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.4■□□□□ 0.547e-7■□□□□ 8.4
DDX39A-207ENST00000588542 C1QL3Q5VWW1 255 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 OLIG3Q7RTU3 272 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 FADS6Q8N9I5 356 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 PNPT1Q8TCS8 783 aaKnown RBP18.4■□□□□ 0.54
DDX39A-207ENST00000588542 DUSP19Q8WTR2 217 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 XAGE5Q8WWM1 108 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 AURKBQ96GD4 344 aaPredicted RBP18.4■□□□□ 0.54
DDX39A-207ENST00000588542 TBL1XR1Q9BZK7 514 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 SLAMF8Q9P0V8 285 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 SPRR3Q9UBC9 169 aa18.4■□□□□ 0.54
DDX39A-207ENST00000588542 A0A096LPI6 279 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 NPIPA5A0A0B4J1W7 369 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 A0A1W2PP18 115 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 NPIPA7E9PJI5 369 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 AQP7O14520 342 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 TRAPPC6AO75865 159 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 KRT75O95678 551 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 ANGPTL1O95841 491 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 AGR2O95994 175 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 AK1P00568 194 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 NPIPA8P0DM63 369 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 ABOP16442 354 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 ATP6V1C1P21283 382 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 CA7P43166 264 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 CLK3P49761 638 aaKnown RBP18.39■□□□□ 0.53
DDX39A-207ENST00000588542 STX5Q13190 355 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 C4orf17Q53FE4 359 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 EIPR1Q53HC9 387 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 LRIF1Q5T3J3 769 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 AP1ARQ63HQ0 302 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 MSRB3Q8IXL7 192 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 FAM83FQ8NEG4 500 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-207ENST00000588542 OR2M3Q8NG83 312 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 NEIL3Q8TAT5 605 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 RELTQ969Z4 430 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 DSN1Q9H410 356 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 LDAHQ9H6V9 325 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 TPT1P8Q9HAU6 139 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 SDHAF3Q9NRP4 125 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 EXD2Q9NVH0 621 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 SLC25A37Q9NYZ2 338 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 PPP4R1LQ9P1A2 415 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 ERRFI1Q9UJM3 462 aaPredicted RBP18.39■□□□□ 0.53
DDX39A-207ENST00000588542 TINAGQ9UJW2 476 aa18.39■□□□□ 0.53
DDX39A-207ENST00000588542 IGLV3-32A0A0A0MS00 114 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 A0A1W2PQD3 144 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 LRRTM2O43300 516 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 FCMRO60667 390 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 LSP1P33241 339 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 DCTP40126 519 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 FLYWCH1Q4VC44 716 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 KLHL26Q53HC5 615 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 EMC4Q5J8M3 183 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.38■□□□□ 0.53
DDX39A-207ENST00000588542 C16orf62Q7Z3J2 963 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 YRDCQ86U90 279 aaKnown RBP18.38■□□□□ 0.53
DDX39A-207ENST00000588542 DOLPP1Q86YN1 238 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 FAM57AQ8TBR7 257 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 OR2B2Q9GZK3 357 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 ZNF350Q9GZX5 532 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 SAR1AQ9NR31 198 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 MED11Q9P086 117 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 TNFRSF10DQ9UBN6 386 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 KCNE5Q9UJ90 142 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 SLC5A6Q9Y289 635 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 HEATR5AQ86XA9 2040 aa18.38■□□□□ 0.53
DDX39A-207ENST00000588542 PHF3Q92576 2039 aaKnown RBP18.38■□□□□ 0.53
DDX39A-207ENST00000588542 ARHGAP21Q5T5U3 1957 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 TRBV5-3A0A0A0MS03 114 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 TRGV8A0A0C4DH27 118 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 OR14I1A6ND48 311 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 NPIPA2E9PIF3 369 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 NPIPA3F8WFD2 350 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 SCDO00767 359 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 STX11O75558 287 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 GUSBP08236 651 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 MAGEA8P43361 318 aa18.37■□□□□ 0.53
DDX39A-207ENST00000588542 ATP12AP54707 1039 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms