RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ATP6V1E1P36543 226 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 DDOSTP39656 456 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 RNF144AP50876 292 aaPredicted RBP13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 TNFRSF17Q02223 184 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 HNRNPA0Q13151 305 aaKnown RBP13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 MANEAQ5SRI9 462 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 FAM180BQ6P0A1 224 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 ABHD13Q7L211 337 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 PAQR7Q86WK9 346 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 IQCF1Q8N6M8 205 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 TMEM145Q8NBT3 493 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 CAMKVQ8NCB2 501 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 C19orf18Q8NEA5 215 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 GPR151Q8TDV0 419 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 SLC9A6Q92581 669 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 FAM131CQ96AQ9 280 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 OTULINQ96BN8 352 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 SLC41A3Q96GZ6 507 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 SHDQ96IW2 340 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 ZNF681Q96N22 645 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 MCHR1Q99705 422 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 XKR8Q9H6D3 395 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 SACM1LQ9NTJ5 587 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 ERVK13-1Q9NX77 482 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 MOSPD1Q9UJG1 213 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 BAIAP2Q9UQB8 552 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 KCNK6Q9Y257 313 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 PCDHGB7Q9Y5F8 929 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 V9GYH0 126 aa13.13□□□□□ -0.31
NEDD4L-223ENST00000588516 A0A0G2JN53 185 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 A0A1W2PP55 124 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 A0A1W2PQL4 384 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 A0A1W2PQU0 124 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 ANTXRLA6NF34 631 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 CENPXA8MT69 81 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 IGFBP1P08833 259 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 CHRM5P08912 532 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 PAICSP22234 425 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 SLC1A3P43003 542 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 OMPP47874 163 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 BTN3A2P78410 334 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 CHRNEQ04844 493 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 MESP2Q0VG99 397 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 FUT5Q11128 374 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 DUSP8Q13202 625 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 TAB1Q15750 504 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 PGGHGQ32M88 737 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 GLYR1Q49A26 553 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 PYDC2Q56P42 97 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 TYW3Q6IPR3 259 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 AMER3Q8N944 861 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 BRIX1Q8TDN6 353 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 ZNF486Q96H40 463 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 HS6ST2Q96MM7 605 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 SDHCQ99643 169 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 BARHL1Q9BZE3 327 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 NEK6Q9HC98 313 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 LYRM4Q9HD34 91 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 PARD6AQ9NPB6 346 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 FBXL12Q9NXK8 326 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 SATB2Q9UPW6 733 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 ZNF443Q9Y2A4 671 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 CAB39Q9Y376 341 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 WDR45Q9Y484 360 aa13.12□□□□□ -0.31
NEDD4L-223ENST00000588516 FASNP49327 2511 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 A0A087WV62 115 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 TRAPPC13A5PLN9 417 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 OTOL1A6NHN0 477 aaPredicted RBP13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 CPSF4LA6NMK7 179 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 RGS13O14921 159 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 CASKO14936 926 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 POLR1CO15160 346 aaPredicted RBP13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 SURF4O15260 269 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 TNFSF14O43557 240 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 IDH3BO43837 385 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 APBB3O95704 486 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 IGHA1P01876 353 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 GUSBP08236 651 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 PRKAR1AP10644 381 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 SPNP16150 400 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 BMP7P18075 431 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 F8A1P23610 371 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 FCARP24071 287 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 CERS1P27544 350 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 HOXD12P35452 270 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 MC3RP41968 323 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 HTR3AP46098 478 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 RAB25P57735 213 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 TAS2R43P59537 309 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 SPEM2Q0P670 501 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 RIN1Q13671 783 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 GAS6Q14393 721 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 QPRTQ15274 297 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 AADACL4Q5VUY2 407 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 TRIQKQ629K1 86 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 C22orf42Q6IC83 251 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 TANGO2Q6ICL3 276 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 MFSD12Q6NUT3 480 aa13.11□□□□□ -0.31
NEDD4L-223ENST00000588516 USP53Q70EK8 1073 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms